DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and dhhc-12

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_492753.2 Gene:dhhc-12 / 186602 WormBaseID:WBGene00010323 Length:310 Species:Caenorhabditis elegans


Alignment Length:260 Identity:60/260 - (23%)
Similarity:89/260 - (34%) Gaps:81/260 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 RLLYGEVKKK----SRWIP----SVSESWGWLFGGAGDSKGPLFLFLFSVLLWGYPMYMI-RAIP 389
            |::|..|:|.    |::.|    .:...||          |.|.|.:|...|......:| :.||
 Worm     9 RIVYFLVEKSLGDISKFDPFDVLKLVALWG----------GRLCLLIFVGTLCNVTYVVIFKMIP 63

  Fly   390 ITWN--------ILRRSHYCFIYWNAVMWISWAIANRRDPGYIPLSSDAYYRAIKQIPYFDKLKK 446
            :.||        :.|.....:||::.|.                    .||:|....|..:.   
 Worm    64 VEWNECQNMSFFVFRFVLLIYIYYSVVF--------------------HYYKARTLTPVVNP--- 105

  Fly   447 RNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFV--LSVAVNC 509
             .......|..|...:.....||:.|::|:...|||||.|..|||..|:..||||:  |.:|...
 Worm   106 -GTPSDSFCIKCNNWKGPSTSHCKACDKCIYRMDHHCPHIGQCVGAHNQSHFFLFLFYLQIATGL 169

  Fly   510 SFTIYFACYCVMIEG-----------------FTMLYVL-----GLIEAVV------FCGLGWIL 546
            .|.:....:...||.                 |...|.|     |..:.:|      |..|.||:
 Worm   170 FFLMATTFWMKWIETRKELTAIPDDQCWPPYCFNRYYYLITRSQGTEDTMVKFAFFLFVTLHWIM 234

  Fly   547  546
             Worm   235  234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185 1/1 (100%)
DHHC 455..567 CDD:334580 34/122 (28%)
dhhc-12NP_492753.2 zf-DHHC 39..>172 CDD:303066 40/156 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165804
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.830

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