DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and dhhc-9

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001362080.1 Gene:dhhc-9 / 183426 WormBaseID:WBGene00016620 Length:313 Species:Caenorhabditis elegans


Alignment Length:208 Identity:50/208 - (24%)
Similarity:69/208 - (33%) Gaps:85/208 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 LFGGAGDSKGPLFLFLFSVLLWGYPMYMIRAIPITWNILRRSHYCFIYWNAVMWISWAIANRRDP 421
            |.|..|      ..|||::   .|..|..|.||                        .:||..:.
 Worm    76 LLGTCG------LYFLFNI---QYHYYKARTIP------------------------PVANPGEE 107

  Fly   422 GYIPLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFI 486
            |      |::                       |..|...:...|.||.||.:||...||||.:|
 Worm   108 G------DSF-----------------------CSKCNYWKSDNAHHCSVCEKCVLGMDHHCIWI 143

  Fly   487 YNCVGLRNRMWFFLFVLSVAVNCSFTIYFACY-----CVMIEGFTMLYVLGLIE----------- 535
            ..||||.|...||||:.::.: .:.||..|.|     .:.:|.....|...::|           
 Worm   144 NQCVGLHNHRHFFLFIANLTL-AAATIIIAGYQSFSDHLFLESSQTTYCTTILEHAPLQDIICDY 207

  Fly   536 ------AVVFCGL 542
                  :||||.|
 Worm   208 DGFARTSVVFCYL 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 35/110 (32%)
dhhc-9NP_001362080.1 DHHC 106..251 CDD:366691 37/145 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165803
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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