DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and dhhc-1

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_510510.1 Gene:dhhc-1 / 181606 WormBaseID:WBGene00008606 Length:295 Species:Caenorhabditis elegans


Alignment Length:265 Identity:70/265 - (26%)
Similarity:99/265 - (37%) Gaps:86/265 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 FLFSVLL-WGYPMYMIRAIPITWN-------ILRRSHYCF------IYWNAVMWISW-------A 414
            |:|.:|| .|..::::..:| ||.       ::|.:  ||      :|.|.|..|..       |
 Worm    32 FIFLILLPCGILLHLLYVLP-TWYPVMGEAWVIRAT--CFGVLVFNLYSNWVYMIKTGPNGHHSA 93

  Fly   415 IANRRDPGYIPLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYF 479
            :.|...|||                             :.||||..:.||||.||.||:.|:...
 Worm    94 LPNVIKPGY-----------------------------KHCHSCHSMSPLRAHHCPVCDVCILRR 129

  Fly   480 DHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIEGFTMLYVLGL--IEAVVFCGL 542
            ||||.|...|||..|:.:|...|:::.:   .|:....|...:....|...:|.  |..||...|
 Worm   130 DHHCSFGAVCVGHFNQRYFVAAVINLFI---MTLPLVSYSWSLLNIKMTNEIGFGNIWQVVIPHL 191

  Fly   543 GWILTCTSI---LHACM------------NLTTNEMF----NYKRYPYLRDKRGRYQNPFSRGPI 588
            .||....||   ||..:            .|.|.::|    ...|..:|.|... ||        
 Worm   192 AWIAGYISIYQFLHVLLFVFTFTVSLFTFYLLTAQVFCIYQGQTRIEFLMDVHA-YQ-------- 247

  Fly   589 LNLLE 593
            |.|||
 Worm   248 LGLLE 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 41/132 (31%)
dhhc-1NP_510510.1 zf-DHHC 98..240 CDD:279823 45/173 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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