DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and LOC100498452

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_017951631.1 Gene:LOC100498452 / 100498452 -ID:- Length:566 Species:Xenopus tropicalis


Alignment Length:500 Identity:212/500 - (42%)
Similarity:295/500 - (59%) Gaps:16/500 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 IFDIIKNGEVSEVENLVDKFGMECLSARDRHGYTPAHWIALNGNVQLMRYLIERTAPIDLPCLGT 182
            ||..:|.|.:.:.:::::......|...|..|:||.||.||.|::|||...::...|:|.|.|..
 Frog    70 IFQAVKEGNIKKCQHILEAESAAVLGCYDEKGHTPVHWAALTGSIQLMELFVDSKGPVDTPSLAE 134

  Fly   183 QGPRPIHWACRKGHASVVQVLLQAGVAVNAADFKGLTPLHLACMYGRTATAAYLLGMGALNNLTD 247
            .|..|||||...|..:||.:||:|||:|:..|.||.|||..|..||:||...||:|.||..||.|
 Frog   135 LGQHPIHWAAVSGSIAVVDILLKAGVSVDVKDQKGCTPLITAAQYGQTALCCYLIGKGAKINLYD 199

  Fly   248 INGDTALHWAAYKGHADLMRLLMYSGVELQKTDNFGSTPLHLACLSGNMTCVRLLCEKSQLDLEP 312
            ..|||||||||:|||.:|..||:|||...::|||||.||||||.||||:..|:||||:..:|||.
 Frog   200 SEGDTALHWAAFKGHCELSHLLIYSGCNPRQTDNFGQTPLHLAVLSGNLPTVQLLCEQDNIDLEG 264

  Fly   313 RDKNGKTPIMLAQAHQHQDVVRLLYGEV--KKKSRWIPSVSESWG-WLFGGAGDSKGPLFLFLFS 374
            .|.|..||:.||...:..|:...|...:  .||..    ...:|. ||||..|.:|||:..|..:
 Frog   265 EDNNRNTPLKLANGRKSWDIASFLQSTIIQSKKHH----AKFNWSTWLFGRPGKTKGPILFFFGN 325

  Fly   375 VLLWGYPMYMIRAIPITWNILRRSHYCFIYWNAVMWISWAIANRRDPGYIPLSSDAYYRAIKQIP 439
            :.|||||.|..:.:|:::..|...|..|:..|.:||..:..|:..|||::|..::.|..|:||..
 Frog   326 LFLWGYPTYFFKIVPVSYYALWELHMMFLLCNTLMWAFFLKASHMDPGFLPQDTEEYKYAVKQAI 390

  Fly   440 YFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVSYFDHHCPFIYNCVGLRNRMWFFLFVLS 504
            ..:..|.....|.||||:|..::|||:||||:.|||||:|||:||:|||.||.|||.:|..|::|
 Frog   391 NCNDWKDGKNPLNRLCHTCHLVKPLRSKHCRITNRCVSHFDHYCPYIYNDVGKRNRAFFVGFLVS 455

  Fly   505 VAVNCSFTIYFACYCVMIEGFTMLYVLGLIEAVVFCGLGWILTCTSILHACMNLTTNEMFNYKRY 569
            :.:.|...:|....|..|.|.::|..:|.|...|...:..:::...:..|.:|:||||..|.|:|
 Frog   456 MCMCCFIGVYLCWDCFYIVGNSILIGIGFIFLSVIGTISALMSVMCLYMAIVNITTNERMNVKKY 520

  Fly   570 PYLRDKRGRYQNPFSRGPILNLLEFF-VCLPDRGDDNDLLLEDNI 613
            .||:|.||.::|||.||..||||||. :..|        |.||.|
 Frog   521 TYLKDDRGHFRNPFDRGFYLNLLEFIDIVAP--------LSEDKI 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738 93/187 (50%)
ANK repeat 148..181 CDD:293786 14/32 (44%)
ANK repeat 187..214 CDD:293786 14/26 (54%)
ANK repeat 216..247 CDD:293786 17/30 (57%)
ANK repeat 249..280 CDD:293786 18/30 (60%)
ANK repeat 282..314 CDD:293786 20/31 (65%)
Ank_4 283..336 CDD:316185 26/52 (50%)
DHHC 455..567 CDD:334580 47/111 (42%)
LOC100498452XP_017951631.1 Ank_2 70..166 CDD:372319 36/95 (38%)
ANK repeat 101..133 CDD:293786 14/31 (45%)
ANK repeat 136..166 CDD:293786 15/29 (52%)
ANKYR <139..269 CDD:223738 75/129 (58%)
ANK repeat 168..199 CDD:293786 17/30 (57%)
ANK repeat 201..226 CDD:293786 17/24 (71%)
DHHC 399..516 CDD:366691 49/116 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6294
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H121926
Inparanoid 1 1.050 428 1.000 Inparanoid score I1701
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D213306at33208
OrthoFinder 1 1.000 - - FOG0009984
OrthoInspector 1 1.000 - - oto104573
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X628
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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