DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and zdhhc13

DIOPT Version :10

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_002942880.3 Gene:zdhhc13 / 100493145 XenbaseID:XB-GENE-997024 Length:612 Species:Xenopus tropicalis


Alignment Length:485 Identity:85/485 - (17%)
Similarity:164/485 - (33%) Gaps:153/485 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 ATVLGADKTSASSNSSASSISSSLSSGSAGSGTASGSSSDSG-TLVNKAA--------------- 401
            |.|......:||:.|:.::.|.|..:.....|..:..::||| .||:.|.               
 Frog     2 AAVATCGSVAASTGSAVATASKSNVTSFQRRGPRASVTNDSGPRLVSIAGTRPSVRNGQLLVSTG 66

  Fly   402 ------VAGSGLAPKFPANILQPDEITVRYRDAIINYSKYRNAGIIETEAALKAARICIEQGKNL 460
                  :.|.|||.. ...:::.|:..: |...:..|  :...||:.....|.|:       ...
 Frog    67 LPALDQLLGGGLAVG-TVLLIEEDKYNI-YSPLLFKY--FLAEGIVNGHTLLVAS-------AKE 120

  Fly   461 DVAMFLQNVLYINLNMTEQQRVRRFEVLTDLYQKIGYNRKA--AFCQRLAAWRH----------V 513
            |.|..||.   :...:.:.:..:.|:  .|:     ||.|.  :..:...|||:          |
 Frog   121 DPANILQE---LPAPLLDDKCKKEFD--EDV-----YNHKTPESNIKMKIAWRYQLLPKMEIGPV 175

  Fly   514 AQSNSNPDWGQSYRLMLESFSGHKLSLEPNEVLENNMGWPVLQIDLLQQLVGTARRLGQSALA-- 576
            :.|.....:..|.|:             |.|::|.: .|...   .|.:.:.:..::...:|.  
 Frog   176 SSSRFGHYYDASKRM-------------PQELIEAS-NWHGF---FLPEKISSTLKVEPCSLTPG 223

  Fly   577 -TRHMTFLLQTMWK------NLTPLEQREMALQLQNLSAQCEGAPVPLVLENG----------IV 624
             |:.:.|:...:::      |....::..:.:.:|||.:...|..: ...|||          .|
 Frog   224 YTKLLQFIQNIIYEEGFDGSNPQKKQRNILRIGIQNLGSPLWGDDI-CCAENGGNSHSLTKFLYV 287

  Fly   625 IPPANLTDLPHCTGLLVKDLPPHLRPVKIVVSKVDSGPFLFTPIHFSSLDRRGVERDDSRITFDW 689
            :.....|.|..|    :..:|.||...|.::::|.:    .:.:........|.||:        
 Frog   288 LRGLLRTSLSAC----IITMPTHLIQNKAIIARVTT----LSDVVVGLESFIGSERE-------- 336

  Fly   690 VQHDVCEVSLALTNPLPFELQVSDMRLLTTGVVFEAFPQTVTLQPNALTNVSLHGTSIECGELEI 754
                        ||||                 ::.:...:.::.....|      ::.|.|.::
 Frog   337 ------------TNPL-----------------YKDYHGLIHIRQIPRLN------NLICDESDV 366

  Fly   755 QGYSTHTLGVKSNCRLKHMLHRKER-HLPP 783
            :..:         .:||..|...|| ||||
 Frog   367 KDLA---------FKLKRKLFTIERLHLPP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 99..343 CDD:440430
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
DHHC 453..567 CDD:396215 21/125 (17%)
zdhhc13XP_002942880.3 ANKYR 28..260 CDD:440430 44/269 (16%)
ANK repeat 71..102 CDD:293786 7/34 (21%)
ANK repeat 104..136 CDD:293786 8/41 (20%)
ANK repeat 138..169 CDD:293786 8/37 (22%)
ANK repeat 171..237 CDD:293786 12/82 (15%)
DHHC 327..>549 CDD:418707 19/113 (17%)
Blue background indicates that the domain is not in the aligned region.

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