DRSC/TRiP Functional Genomics Resources

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Protein Alignment Patsas and zdhhc12a

DIOPT Version :9

Sequence 1:NP_001356957.1 Gene:Patsas / 34634 FlyBaseID:FBgn0029137 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_002663098.1 Gene:zdhhc12a / 100332332 ZFINID:ZDB-GENE-081104-40 Length:270 Species:Danio rerio


Alignment Length:202 Identity:63/202 - (31%)
Similarity:88/202 - (43%) Gaps:39/202 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 DPGYI-------PLSSDAYYRAIKQIPYFDKLKKRNVMLTRLCHSCRCLRPLRAKHCRVCNRCVS 477
            |||::       ..|.|........||     :::|.:..|.|..|..|:|:||:||:.|.|||.
Zfish    67 DPGFVLSDSQTETASGDGDEELEAMIP-----QEQNSIKQRRCGYCFLLQPMRARHCKWCKRCVR 126

  Fly   478 YFDHHCPFIYNCVGLRNRMWFFLFVLSVAVNCSFTIYFACYCVMIE----GF------------T 526
            .||||||:|.||||..|..||.|::      |   :.|...|..::    ||            .
Zfish   127 RFDHHCPWIDNCVGELNHRWFLLYL------C---VQFTAVCWGLQSAWSGFISAPSWQQWFTQN 182

  Fly   527 MLYVLGLIEAVVFCGLGWILTCTSILHACMNLTTNEMFNYKRYPYLRDKRGRYQNPFSRGPILNL 591
            :..::......||..:..:|.|.....|.:|.||.|..:..|..||:..... :|||.||...||
Zfish   183 VFLLVAFAVTAVFSVVLLLLLCIHAYLASVNCTTWEFMSRHRILYLKHVDSE-ENPFDRGVFCNL 246

  Fly   592 LEF-FVC 597
            ..| .||
Zfish   247 WSFCCVC 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PatsasNP_001356957.1 ANKYR 113..306 CDD:223738
ANK repeat 148..181 CDD:293786
ANK repeat 187..214 CDD:293786
ANK repeat 216..247 CDD:293786
ANK repeat 249..280 CDD:293786
ANK repeat 282..314 CDD:293786
Ank_4 283..336 CDD:316185
DHHC 455..567 CDD:334580 41/127 (32%)
zdhhc12aXP_002663098.1 DHHC 104..221 CDD:396215 41/125 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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