DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ced-12 and AT2G44770

DIOPT Version :10

Sequence 1:NP_609548.1 Gene:Ced-12 / 34633 FlyBaseID:FBgn0032409 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_566027.1 Gene:AT2G44770 / 819086 AraportID:AT2G44770 Length:266 Species:Arabidopsis thaliana


Alignment Length:252 Identity:56/252 - (22%)
Similarity:108/252 - (42%) Gaps:40/252 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 ALIGNGLG----------TEMTHQLYVLQTLTLGLLEKRMRMKMNAQDQDAHEKIKELRRIAF-D 324
            |.:|.||.          ...|..|...|...|..|:.|:.:..::......|.::||.:::| :
plant    37 AWLGRGLSCVCAQRRDSDANSTFDLTPAQEECLQSLQNRIDVAYDSTIPLHQEALRELWKLSFPE 101

  Fly   325 DNTNALNQNDDHIRRGGGSGAGNVNFSQYYKKLGFKCDINPAQDFIETPPGILALDCMVYFARNY 389
            :..:.|                   .|:.:|::|:: ..:|:.||  ...|.::|:.::|||||:
plant   102 EELHGL-------------------ISEQWKEMGWQ-GKDPSTDF--RGGGFISLENLLYFARNF 144

  Fly   390 TQQYAKIVRENSCRADEHECPFGRTSIELVKVLCDILRIG--EPPAEQSGDFQPMFFTHDSPFEE 452
            .:.:..::|:........|.||....|.|..:|..:|.:.  :|.......|......::|.|:.
plant   145 QKSFQDLLRKQVGDRSVWEYPFAVAGINLTFMLIQMLDLEAVKPRTIVGATFLKFLSENESAFDL 209

  Fly   453 FFCICVITLNRTWKDMRATAEDFSTTFSVVREQIQRTLKGRPENLDDFRNKIALLTY 509
            .:||....:::.|..|||:..:|:|.....|.|::|.|.     |:|..:...|.:|
plant   210 LYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLERELM-----LEDIMHLEDLPSY 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ced-12NP_609548.1 ELMO_ARM 122..277 CDD:463369 2/5 (40%)
ELMO_CED12 295..477 CDD:461411 39/184 (21%)
PH_ELMO1_CED-12 546..673 CDD:270166
AT2G44770NP_566027.1 ELMO_CED12 72..236 CDD:461411 40/185 (22%)
Blue background indicates that the domain is not in the aligned region.

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