DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ced-12 and ELMO3

DIOPT Version :9

Sequence 1:NP_609548.1 Gene:Ced-12 / 34633 FlyBaseID:FBgn0032409 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_078988.3 Gene:ELMO3 / 79767 HGNCID:17289 Length:720 Species:Homo sapiens


Alignment Length:730 Identity:310/730 - (42%)
Similarity:441/730 - (60%) Gaps:39/730 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HIVKIAVEREDHIAQLINLDQRHPLASKIQEICNGWSISDHQNYALQFYEPTNRKYVTEKNRNEI 76
            ::||||::..|.|.|||.|||..|||:.::|:|:.||::..:.|||||.: .:|:|:||.||.||
Human     6 NVVKIAIKMRDAIPQLIQLDQAKPLAAVLKEVCDAWSLTHSERYALQFAD-GHRRYITENNRAEI 69

  Fly    77 KNGSVLQLQYSPSKTACDAMEVLLNGSPQEKALRLKELTSLSTDHTFALEFIKEKGLDTLIKMIE 141
            ||||:|.|..:|...|...:..|.:.||:.:...|:.|..|::|..||.|.|...||..|..:||
Human    70 KNGSILCLSTAPDLEAEQLLGGLQSNSPEGRREALRRLVPLASDMIFAREVISRNGLQILGTIIE 134

  Fly   142 DGGQTNEDILKYSLASFVELMEHGTVSWEVPENSFVARNIEIVRNFQKYPTNCGESALSNLENIV 206
            ||....| :|..||.:|.||||||.||||.....|| |.:....|......:....||..||::.
Human   135 DGDDLGE-VLALSLRAFSELMEHGVVSWETLSIPFV-RKVVCYVNMNLMDASVPPLALGLLESVT 197

  Fly   207 MCSNK-HVLVAEDIKLQDILRLLQDVNSPVMRQNAIALLNALFVKADEGRRRTIAQTISAKQFRL 270
            :.|.. ..||..::.|..:|..||.:|.. ::..|:|||.||...|....|:.:...:..:..|.
Human   198 LSSPALGQLVKSEVPLDRLLVHLQVMNQQ-LQTKAMALLTALLQGASPVERKHMLDYLWQRNLRQ 261

  Fly   271 ALIGN------GLGTEMTHQLYVLQTLTLGLLEKRMRMKMNAQDQDAHEKIKELRRIAFDDNTNA 329
            .:..|      .:|.||.|.|||||.|.|||||.|||..::...|:..|:::.||:.||:     
Human   262 FIYKNIIHSAAPMGDEMAHHLYVLQALMLGLLEPRMRTPLDPYSQEQREQLQVLRQAAFE----- 321

  Fly   330 LNQNDDHIRRGGGSGAG------NVNFSQYYKKLGFKCDINPAQDFIETPPGILALDCMVYFARN 388
                    ..|..||||      ....::.::||||. :.|||||....|||:||||.|:||:||
Human   322 --------VEGESSGAGLSADRRRSLCAREFRKLGFS-NSNPAQDLERVPPGLLALDNMLYFSRN 377

  Fly   389 YTQQYAKIVRENSCRADEHECPFGRTSIELVKVLCDILRIGEPPAEQSGDFQPMFFTHDSPFEEF 453
            ....|::.|.|||.|.|:|||||.|.||:|..:||::||:|||.:|.:.||.||||..|..|.|.
Human   378 APSAYSRFVLENSSREDKHECPFARGSIQLTVLLCELLRVGEPCSETAQDFSPMFFGQDQSFHEL 442

  Fly   454 FCICVITLNRTWKDMRATAEDFSTTFSVVREQIQRTLKGRPENLDDFRNKIALLTYQQITTLRQQ 518
            ||:.:..||:|||:||||.|||.....|||||:.|||..:|.:|:.||.|:..|||.::..|||.
Human   443 FCVGIQLLNKTWKEMRATQEDFDKVMQVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQT 507

  Fly   519 ERTSKEECDSTASAIVKLKEKISPQILELIKQQRLSFLVEGTHFAKYLRGTRTKDKFWYARLSPN 583
            ||..:|  .:.|..|::|:||:.|:::.||:||||..|.|||.|.| :...|.:||.|:..||||
Human   508 ERLHQE--GTLAPPILELREKLKPELMGLIRQQRLLRLCEGTLFRK-ISSRRRQDKLWFCCLSPN 569

  Fly   584 HKVIHYGDCDE-KTIPTMEELPKKLPISEIKQLLEGKECPHMKET---RIRKSAVNLAFSITFE- 643
            ||::.|||.:| .:.||:|.||::||:::::.||.||:|||::|.   :..|....|||||::: 
Human   570 HKLLQYGDMEEGASPPTLESLPEQLPVADMRALLTGKDCPHVREKGSGKQNKDLYELAFSISYDR 634

  Fly   644 NMEHSTLDFVAPDESIFNYWTDGINALLGQPMVSKQKNEDFDTLLSMEIKLRLLDTEGVDISKDP 708
            ..|.:.|:|:||.:..|..||||::||||.||.|:|...|.:.||:||.|||||:.|.|.|.:.|
Human   635 GEEEAYLNFIAPSKREFYLWTDGLSALLGSPMGSEQTRLDLEQLLTMETKLRLLELENVPIPERP 699

  Fly   709 PPIPEDPENYDFCFE 723
            ||:|..|.|::||::
Human   700 PPVPPPPTNFNFCYD 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ced-12NP_609548.1 DUF3361 122..275 CDD:288674 51/153 (33%)
ELMO_CED12 296..474 CDD:282570 81/183 (44%)
PH_ELMO1_CED-12 546..673 CDD:270166 60/131 (46%)
ELMO3NP_078988.3 DUF3361 116..267 CDD:314671 51/153 (33%)
ELMO_CED12 292..463 CDD:309737 82/184 (45%)
PH_ELMO1_CED-12 534..663 CDD:270166 59/129 (46%)
SH3-binding 696..706 4/9 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 206 1.000 Domainoid score I2908
eggNOG 1 0.900 - - E1_KOG2999
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 622 1.000 Inparanoid score I876
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177102at33208
OrthoFinder 1 1.000 - - FOG0001427
OrthoInspector 1 1.000 - - otm41511
orthoMCL 1 0.900 - - OOG6_102058
Panther 1 1.100 - - O PTHR12771
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1314
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.830

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