DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ced-12 and elmo3

DIOPT Version :9

Sequence 1:NP_609548.1 Gene:Ced-12 / 34633 FlyBaseID:FBgn0032409 Length:724 Species:Drosophila melanogaster
Sequence 2:XP_017209693.1 Gene:elmo3 / 553310 ZFINID:ZDB-GENE-050309-39 Length:724 Species:Danio rerio


Alignment Length:737 Identity:312/737 - (42%)
Similarity:452/737 - (61%) Gaps:45/737 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KDSHIVKIAVEREDHIAQLINLDQRHPLASKIQEICNGWSISDHQNYALQFYEPTNRKYVTEKNR 73
            ||  |||||::......|||.|||:.||.|.|:|:|:.|::...:||||| |....:.|:||.||
Zfish     5 KD--IVKIAIQMPGAYPQLIQLDQKKPLTSVIKEVCDKWNLPGPENYALQ-YADGIQTYITESNR 66

  Fly    74 NEIKNGSVLQLQYSPSKTACDAMEVLLNGSPQEKALRLKELTSLSTDHTFALEFIKEKGLDTLIK 138
            .:|||||:|:|..:|.:.|.|..:.:.:.....:...|..|..:|||.|||.|||...|...|:|
Zfish    67 LDIKNGSILRLTKAPGRCAEDLYKGIQSSDSNVRCDSLNLLAIVSTDITFAQEFISRDGHSLLVK 131

  Fly   139 MIEDGGQTNEDILKYSLASFVELMEHGTVSWEVPENSFVARNIEIVRNFQKYPTNCGESALSNLE 203
            ::|| .|.:..|:.::|.:|:|||:||.||||...:.|:.:....| |.:...|:..:.:|:.||
Zfish   132 IVED-AQESPVIMTHTLTAFMELMDHGIVSWENLSSVFIKKMASFV-NAKVLDTSIQQVSLAILE 194

  Fly   204 NIVMCSNK-HVLVAEDIKLQDILRLLQ-----DVNSPVMRQ---NAIALLNALFVKADEGRRRTI 259
            ::|:.|:. ...|.::|.|:.:|..||     .:::...:|   .|:|||.||.....|..|:.:
Zfish   195 SMVLSSSSLFTEVKQEITLERLLSHLQVYVDYTIHTRTNQQLQTKAMALLMALLQAGGEADRQEL 259

  Fly   260 AQTISAKQFRLALIGN------GLGTEMTHQLYVLQTLTLGLLEKRMRMKMNAQDQDAHEKIKEL 318
            .:.:..:..|..:..|      .:|.||.|.||||||:.|..||.||:..:::..|:..|.:..|
Zfish   260 FEFLEKRNLRQYIHKNIIHSSSSVGDEMAHYLYVLQTVRLNHLEPRMKTPLDSYSQEQREMLHGL 324

  Fly   319 RRIAFDDNTNALNQNDDHIRRGGGSGAGNVN----FSQYYKKLGFKCDINPAQDFIETPPGILAL 379
            |:.||:..:.              ||..|..    .::.:|||||..:.||.||....|||:|||
Zfish   325 RQAAFETESE--------------SGLSNERRRSLCAKEFKKLGFSNNSNPGQDLSRCPPGLLAL 375

  Fly   380 DCMVYFARNYTQQYAKIVRENSCRADEHECPFGRTSIELVKVLCDILRIGEPPAEQSGDFQPMFF 444
            |.|.|||..|...|::.|.|||.|.|:|||||.|:||:|..:||:||||||||:|...|:.|:||
Zfish   376 DTMAYFASRYPDAYSRFVLENSSREDKHECPFARSSIQLTLILCEILRIGEPPSETGSDYHPIFF 440

  Fly   445 THDSPFEEFFCICVITLNRTWKDMRATAEDFSTTFSVVREQIQRTLKGRPENLDDFRNKIALLTY 509
            ..|...||.||||:..||:|||:||||.|||.....||||||.|||..:|.:|:.|:||:..|.|
Zfish   441 AQDRLLEELFCICIQLLNKTWKEMRATQEDFDKVMQVVREQITRTLASKPTSLELFKNKVNALNY 505

  Fly   510 QQITTLRQQERTSKEECDSTASAIVKLKEKISPQILELIKQQRLSFLVEGTHFAKYLRGTRTKDK 574
            .:|..|||.||..:||  :.|..:::|||::.|::||||:||||:.|..||.|.| :...|.:||
Zfish   506 SEILKLRQTERLHQEE--TLAPPVLELKERLKPELLELIRQQRLNRLCHGTLFRK-MSSRRRQDK 567

  Fly   575 FWYARLSPNHKVIHYGDCDEKT-IPTMEELPKKLPISEIKQLLEGKECPHMKETRIR--KSAVNL 636
            .||.||||||||:||||.:|:| :|::|.|..|:|:::||.::.||:||||||.:.:  |..::|
Zfish   568 LWYCRLSPNHKVLHYGDVEEETEMPSIEALQDKIPVADIKNVVTGKDCPHMKENKGKQTKEVLDL 632

  Fly   637 AFSITFENMEHSTLDFVAPDESIFNYWTDGINALLGQPMVSKQKNEDFDTLLSMEIKLRLLDTEG 701
            |||||::..|:| |:|:|...:.|..||||::.|||:.|.|:....:.:.||||||||||||.|.
Zfish   633 AFSITYDVEEYS-LNFIASSRTDFCLWTDGLSVLLGKEMSSESMRSELEILLSMEIKLRLLDLEN 696

  Fly   702 VDISKDPPPIPEDPENYDFCFE 723
            |.|....||||:.|.|::||::
Zfish   697 VPIPDAAPPIPKPPSNFNFCYD 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ced-12NP_609548.1 DUF3361 122..275 CDD:288674 49/161 (30%)
ELMO_CED12 296..474 CDD:282570 81/181 (45%)
PH_ELMO1_CED-12 546..673 CDD:270166 65/129 (50%)
elmo3XP_017209693.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2920
eggNOG 1 0.900 - - E1_KOG2999
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 592 1.000 Inparanoid score I940
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177102at33208
OrthoFinder 1 1.000 - - FOG0001427
OrthoInspector 1 1.000 - - otm24671
orthoMCL 1 0.900 - - OOG6_102058
Panther 1 1.100 - - O PTHR12771
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1314
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.830

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