DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ced-12 and CG10068

DIOPT Version :9

Sequence 1:NP_609548.1 Gene:Ced-12 / 34633 FlyBaseID:FBgn0032409 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_649695.1 Gene:CG10068 / 40852 FlyBaseID:FBgn0037473 Length:316 Species:Drosophila melanogaster


Alignment Length:350 Identity:70/350 - (20%)
Similarity:118/350 - (33%) Gaps:113/350 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 YPTNCGESALSNLENIVMCSNKHVLVAEDIKLQDILRLLQDVNSPVMRQNAIALLNALFVKADEG 254
            |....|.|..|.:|..:..|          |...|.||:.|::     :.|..:.||..:.....
  Fly    37 YGAKAGASRTSQVERSLTLS----------KRPQIRRLVLDLD-----EAAPYVSNAELLDFAPR 86

  Fly   255 RRRTIAQTISAKQFR-------LALIGNGLGT-----EMTHQLYVLQTLTLGLLEKRMRMKMNAQ 307
            ..|.:.|   ||:.:       ..|.|..:.:     .:.||           :|:....|.::.
  Fly    87 AARIVMQ---AKRIKNNVHPDFARLFGTCVTSIWGYRRLMHQ-----------VEQLRAEKYDSD 137

  Fly   308 DQDAHEKIKELRRIAFDDNTNALNQNDDHIRRGGGSGAGNVNFSQYYKKLGFKCDINPAQDFIET 372
            :.|..:|:..|.::...|...                .|.|  ::.::.:||:.| :|..||  .
  Fly   138 NLDHEQKLLRLWQLLMPDTPL----------------TGRV--TKQWQDIGFQGD-DPKTDF--R 181

  Fly   373 PPGILALDCMVYFARNYTQQYAKIVRENSCRADEHECPFGRT----SIELVKVLCDILRIGEPPA 433
            ..|:|.|:.::|||..|... ||.|..:|...     ..|.|    .|.|..:..::::.|....
  Fly   182 GMGMLGLENLLYFATAYNDA-AKHVLLHSMHP-----TLGYTYAIVGINLTSMAFNLVKTGAAKT 240

  Fly   434 EQSGDFQPMFFTHDSPF---EEF---FCICVITLNRTWKDMRATAEDFSTTFSVVREQIQRTLKG 492
            .    |..:...|...|   |:|   :|......:|.|                        ::.
  Fly   241 H----FYNLVVQHRQDFSTVEDFHKLYCYLFFEFDRFW------------------------MES 277

  Fly   493 RPENLDDFRNKIALLTYQ--QITTL 515
            .|.|:.|||.     .||  :||.|
  Fly   278 DPRNIMDFRE-----IYQSFEITKL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ced-12NP_609548.1 DUF3361 122..275 CDD:288674 19/91 (21%)
ELMO_CED12 296..474 CDD:282570 38/187 (20%)
PH_ELMO1_CED-12 546..673 CDD:270166
CG10068NP_649695.1 ELMO_CED12 126..284 CDD:282570 40/212 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12771
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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