DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ced-12 and Elmo3

DIOPT Version :9

Sequence 1:NP_609548.1 Gene:Ced-12 / 34633 FlyBaseID:FBgn0032409 Length:724 Species:Drosophila melanogaster
Sequence 2:XP_030099358.1 Gene:Elmo3 / 234683 MGIID:2679007 Length:747 Species:Mus musculus


Alignment Length:753 Identity:311/753 - (41%)
Similarity:442/753 - (58%) Gaps:58/753 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HIVKIAVEREDHIAQLINLDQRHPLASKIQEICNGWSISDHQNYALQFYEPTNRKYVTEKNRNEI 76
            ::|||||:..|.|.|||.|||..|||:.::|:|:.||::..::|||||.: .:|||:||.||.||
Mouse     6 NVVKIAVQMSDAIPQLIQLDQAKPLATVLKEVCDAWSLTHPEHYALQFAD-GHRKYITENNRLEI 69

  Fly    77 KNGSVLQLQYSPSKTACDAMEVLLNGSPQEKALRLKELTSLSTDHTFALEFIKEKGLDTLIKMIE 141
            ||||:|.|..:|...|...:..|.|.|.:.....|:.|..|::|.|||.|.|...||..|..:||
Mouse    70 KNGSILCLSTAPDLKAQQLLGRLQNTSREGCCEVLRNLVLLASDMTFAQEVISRDGLQKLSTIIE 134

  Fly   142 DGGQTNEDILKYSLASFVELMEHGTVSWEVPENSFVARNIEIVRNFQKYPTNCGESALSNLENIV 206
            :|....| :|...|.:|:||||||.||||....|||.:.|..| |......:....||..||::.
Mouse   135 NGDDLGE-MLALGLRAFLELMEHGVVSWETLSISFVRKVISYV-NMNLMDASVQPLALRLLESVT 197

  Fly   207 MCSNK-HVLVAEDIKLQDILRLLQDVNSPVMRQNAIALLNALFVKADEGRRRTIAQTISAKQFRL 270
            :.|.. ..||..::.|..:|..||.:|.. ::..|:|||.||...|....|:.:...:..|..|.
Mouse   198 LSSPALGQLVKSEVPLDRLLVHLQVMNHQ-LQTKAMALLTALLQGASPTERKEMLDHLWKKNLRQ 261

  Fly   271 ALIGNG---------------------------------LGTEMTHQLYVLQTLTLGLLEKRMRM 302
            .:...|                                 :|.||.|.|||||.|||||||.|||.
Mouse   262 FIYKVGWTRPRRPSPQSSFPWESHPSLVVFQNIIHSATPMGDEMAHHLYVLQALTLGLLEPRMRT 326

  Fly   303 KMNAQDQDAHEKIKELRRIAFDDNTNALNQNDDHIRRGGGSGAGNVN--FSQYYKKLGFKCDINP 365
            .::...|:..::::.||:.||:....:|         |.|..|....  ..:.::||||. :.||
Mouse   327 PLDPYSQEQRDQLQALRQAAFEPEGESL---------GTGLSADRRRSLCVREFRKLGFS-NSNP 381

  Fly   366 AQDFIETPPGILALDCMVYFARNYTQQYAKIVRENSCRADEHECPFGRTSIELVKVLCDILRIGE 430
            |||....|||:||||.|:||:|:....|::.|.|||.|.|:|||||.|:||:|..:||::||:||
Mouse   382 AQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTALLCELLRVGE 446

  Fly   431 PPAEQSGDFQPMFFTHDSPFEEFFCICVITLNRTWKDMRATAEDFSTTFSVVREQIQRTLKGRPE 495
            |.:|.:.||.||||:.|..|.|.||:.:..||:|||:||||.|||.....|||||:.|||..:|.
Mouse   447 PCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDFDKVMQVVREQLARTLALKPT 511

  Fly   496 NLDDFRNKIALLTYQQITTLRQQERTSKEECDSTASAIVKLKEKISPQILELIKQQRLSFLVEGT 560
            :|:.||.|:..|||.::..|||.||..:|  .:.|..|::|:||:.|:::.||:||||..|.||.
Mouse   512 SLELFRTKVNALTYGEVLRLRQTERLHQE--GTLAPPILELREKLKPELMGLIRQQRLLRLCEGM 574

  Fly   561 HFAKYLRGTRTKDKFWYARLSPNHKVIHYGDCDE-KTIPTMEELPKKLPISEIKQLLEGKECPHM 624
            .|.| :...|.:||.|:..|||||||:.|||.:| ...||:|.||::||:::|:.||.||:|||:
Mouse   575 LFRK-ISSRRRQDKLWFCCLSPNHKVLQYGDVEEGAKPPTLESLPEQLPVADIRALLMGKDCPHV 638

  Fly   625 KET---RIRKSAVNLAFSITFEN-MEHSTLDFVAPDESIFNYWTDGINALLGQPMVSKQKNEDFD 685
            :|.   :..|....|||||:::: .|.:.|:|:||.:..|..||||::||||..|.|:....|.:
Mouse   639 REKGSGKQNKDLYELAFSISYDHGEEEAYLNFIAPSKRDFYLWTDGLSALLGSTMGSELTRLDLE 703

  Fly   686 TLLSMEIKLRLLDTEGVDISKDPPPIPEDPENYDFCFE 723
            .||:||.|||||:.|.|.|.:.|||:|..|.|::||::
Mouse   704 QLLTMETKLRLLELENVPIPEQPPPVPPPPTNFNFCYD 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ced-12NP_609548.1 DUF3361 122..275 CDD:288674 53/153 (35%)
ELMO_CED12 296..474 CDD:282570 78/179 (44%)
PH_ELMO1_CED-12 546..673 CDD:270166 61/131 (47%)
Elmo3XP_030099358.1 DUF3361 115..266 CDD:371757 53/153 (35%)
ELMO_CED12 319..490 CDD:368083 79/180 (44%)
PH-like 561..690 CDD:388408 60/129 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 206 1.000 Domainoid score I2902
eggNOG 1 0.900 - - E1_KOG2999
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 624 1.000 Inparanoid score I870
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177102at33208
OrthoFinder 1 1.000 - - FOG0001427
OrthoInspector 1 1.000 - - otm43562
orthoMCL 1 0.900 - - OOG6_102058
Panther 1 1.100 - - O PTHR12771
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1314
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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