DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ced-12 and ced-12

DIOPT Version :9

Sequence 1:NP_609548.1 Gene:Ced-12 / 34633 FlyBaseID:FBgn0032409 Length:724 Species:Drosophila melanogaster
Sequence 2:NP_001293276.1 Gene:ced-12 / 172890 WormBaseID:WBGene00000426 Length:738 Species:Caenorhabditis elegans


Alignment Length:787 Identity:162/787 - (20%)
Similarity:325/787 - (41%) Gaps:142/787 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PKKTTVKDSHIVK--IAVERE----DHIAQL-----------IN-LDQRHPLASKIQEICNGWSI 49
            |..|::.: |:||  :.:::|    :|.|.:           || |:|:  |...::......::
 Worm    19 PVDTSLPE-HVVKGAVVIDKEFTIWNHRAVIPSNALHTVFITINLLEQK--LTDVVKMAARSMNL 80

  Fly    50 SDHQNYALQFYEPTNRKYVTEKNRNEIKNGSVLQLQYSPSKTACDAMEVLLNG---SPQEKALRL 111
            |:..:|.|...:|  ::::|:.|.|.:.:|.:|.|..||........|:|..|   |..|.|  :
 Worm    81 SEDDSYGLMADKP--KRFITDDNLNSLGSGFILTLCASPDHYVKRITEILTEGNNISQMENA--V 141

  Fly   112 KELTSLSTDHTFALEFIKEKGLDTLIKMIEDG----GQTNEDILKYSLASFVELMEHGTVSWE-V 171
            |.|...|.|......|.:...|:.|..:|.|.    ..|.......:|:|.:||.. |..:|: |
 Worm   142 KTLDEFSLDPALIEAFYRCSSLELLFSLIRDDRVCMSSTLLSTCLRALSSMLELAV-GDFTWKSV 205

  Fly   172 PENSFVARNIEIVRNFQKYPTNCGESALSNLENIVMCSN-KHVLVAEDIKLQDILRLLQDVNSPV 235
            |.:..|:....:....::...|...:||..||.:|:..: ....:.|::.::.::|.::..:..:
 Worm   206 PNDVVVSMASLVTGKAKREEANTLLAALQMLEQLVIGDDTTRDWILEEVPIETLIRHVEKSDERI 270

  Fly   236 MRQNAIALLNALFVKA-DEGRRRTIAQTISAKQFRLA----LIGNGLGT---EMTHQLYVLQTLT 292
             ...|::|:|::..:. |:.:|..:.:::....||.|    |:..|.|.   ....||..:|...
 Worm   271 -ALCALSLMNSMIRRCPDDEKRFELIKSLEVVPFRNAVHSSLLRGGGGVRNLNAIEQLVEVQRSL 334

  Fly   293 LGLLEKRMRMKMNAQ-------DQDAHEKIKELRRIAFDDNTNALNQNDDHIRRGGGSGAGNVNF 350
            :...|.........|       .:|..|:|:|:.:          :|..:|              
 Worm   335 ISAYETSPPTDAEVQKILDIESSEDVSEEIREMWK----------SQIGEH-------------- 375

  Fly   351 SQYYKKLGFKCDINPAQDFIETPPGILALDCMVYFARNYTQQYAKIVRENSCRADEHECPFGRTS 415
                     :|             |.||...||.||....|....::.||:.|.:..:.......
 Worm   376 ---------RC-------------GRLAAISMVQFAEKSPQDLRMLISENTMRIEGGKWQLIPMW 418

  Fly   416 IELVKVLCDILRIGEPPAEQSGDFQPMFFTHDSPFEEFFCICVITLNRTWKDMRATAEDFSTTFS 480
            :....:..::.|: .|..::......:.|:.::||...|...|...:|||::|:|...:......
 Worm   419 MRCCDIAAELFRV-IPGRDELDRLIVVLFSTETPFPAVFACIVHLFHRTWREMQAKGGEMEKVAC 482

  Fly   481 VVREQIQRTLKGRP-ENLDDFRNKIALLTYQQITTLRQQERTSKEECDSTASAIVKLKEKISPQI 544
            ||.||::..||.|. :::::....:...:|:.:..:.::|:..||.....:.|:::||.|:.|::
 Worm   483 VVLEQLRHVLKRREIQDVEELSADLETFSYRAMQEIWREEQLGKENIQLHSEAVIQLKSKLRPKM 547

  Fly   545 LELIKQQRLSFLVEGTHFAKYLRG-TRTKDKFWYARLSPNHKVIHYGDCDEKT------------ 596
            .||::...|::|..|..|.|..:. :..|..||:.:|..:.|::....||.:.            
 Worm   548 EELVRINHLNYLKLGAVFRKPQKSKSLAKLAFWHWKLDASEKMLTITGCDGENYVEGVQRDDIRQ 612

  Fly   597 --------IPTMEELPKKLPISEI-----KQLLEGKECPHMKETRIRKSAVNLAFSITFENMEHS 648
                    :...:|:.:|...|..     .|:|.|               :.:....|.:..|..
 Worm   613 VWIKDIADVTNNDEIDRKASSSRFTSSPSTQMLRG---------------IRVQLKTTNDMKEGE 662

  Fly   649 TLDFVAPDESIFNYWTDGINALLGQPMVSKQKNEDFDTLLSMEIKLRLLDTEGVDISKDP--PPI 711
            .|..:..||:....|.:|:..|:|...|..:.:...:.:|.||:::|||:.:..:..:.|  |||
 Worm   663 VLMALTSDETQSVIWLEGLAELIGSKAVKSETDAMVERMLKMELRVRLLNVKLTNPEEKPEIPPI 727

  Fly   712 PEDPENY 718
            |:|.:::
 Worm   728 PDDIKSF 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ced-12NP_609548.1 DUF3361 122..275 CDD:288674 32/163 (20%)
ELMO_CED12 296..474 CDD:282570 32/184 (17%)
PH_ELMO1_CED-12 546..673 CDD:270166 28/152 (18%)
ced-12NP_001293276.1 DUF3361 163..311 CDD:371757 30/149 (20%)
ELMO_CED12 <377..472 CDD:368083 23/108 (21%)
PH_12 551..686 CDD:374554 26/149 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2999
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56685
Inparanoid 1 1.050 128 1.000 Inparanoid score I3234
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52862
OrthoDB 1 1.010 - - D177102at33208
OrthoFinder 1 1.000 - - FOG0001427
OrthoInspector 1 1.000 - - oto18735
orthoMCL 1 0.900 - - OOG6_102058
Panther 1 1.100 - - LDO PTHR12771
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2448
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.910

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