DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6712 and rpf1

DIOPT Version :9

Sequence 1:NP_477479.1 Gene:CG6712 / 34631 FlyBaseID:FBgn0032408 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001002160.2 Gene:rpf1 / 415250 ZFINID:ZDB-GENE-040625-177 Length:355 Species:Danio rerio


Alignment Length:366 Identity:162/366 - (44%)
Similarity:230/366 - (62%) Gaps:27/366 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TDSSDEEAASSSK-KTAKQGEASEDLKEEDDDDDEEENDDDDEEEDDDDDDDKKTRIPVLNP--- 99
            |||:.....|..| ||.|.....:.:|...::.|:.|.:..:|         |....|...|   
Zfish     4 TDSTSSGHVSKKKSKTKKLKRTMKAVKAPVEEMDQAECEVKEE---------KSASGPCFPPTFS 59

  Fly   100 LSWMRNKEQRLALYKKMKKEKHKKKMQ-------ERRARRKAGVPANPGHTIESLREKDQTEVAN 157
            :|.::||::|..::.|:|:||.||:|:       ||:|......|.....|||:.|..|:|.|  
Zfish    60 VSEIKNKQRRHTMFLKLKEEKRKKRMELKKKKKKERKALGDKAPPKEVPKTIENQRIYDETTV-- 122

  Fly   158 LNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIFPNALVKIRNKSS 222
              :.::||:..:...|:||:||.|...||||||.:|.|..:|.:|..:|:.:.|:|.|..|...:
Zfish   123 --NPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAYVYYRRGLA 185

  Fly   223 VKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVKLTSDIKRDHKEITKHRP 287
            :||:........||.::::||||:.|||:::.|||:|||||||:|:|:|..::||..|..|:|.|
Zfish   186 LKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKEMKRRGKNPTEHSP 250

  Fly   288 EVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDYIFFRHHRYEFTKEGKRVKLREL 352
            ||||||||||||.::||:..|||.|||:|.||:..|||||||:||||.|||.|..| |:|.::||
Zfish   251 EVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFRFHRYIFKNE-KKVGIQEL 314

  Fly   353 GPRFTLKLRSLQEGTFDSKTGDYAWIISNKRHAMESRRRFF 393
            ||||||||||||:||||||.|:|.|:  :|||.|:|.||.|
Zfish   315 GPRFTLKLRSLQKGTFDSKFGEYEWV--HKRHEMDSSRRKF 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6712NP_477479.1 Brix 188..358 CDD:214879 89/169 (53%)
rpf1NP_001002160.2 Brix 151..320 CDD:214879 89/169 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581703
Domainoid 1 1.000 185 1.000 Domainoid score I3325
eggNOG 1 0.900 - - E1_COG2136
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68728
Inparanoid 1 1.050 282 1.000 Inparanoid score I2864
OMA 1 1.010 - - QHG53520
OrthoDB 1 1.010 - - D768872at2759
OrthoFinder 1 1.000 - - FOG0004778
OrthoInspector 1 1.000 - - oto41076
orthoMCL 1 0.900 - - OOG6_102467
Panther 1 1.100 - - LDO PTHR22734
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3362
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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