DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and HESX1

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_003856.1 Gene:HESX1 / 8820 HGNCID:4877 Length:185 Species:Homo sapiens


Alignment Length:166 Identity:54/166 - (32%)
Similarity:74/166 - (44%) Gaps:26/166 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 IREGVCDRSTAPSVSAIS-RLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKP 193
            ::||.......||..:.| ..:.|.|...|.........|..|   ..||.|.|.:...|....|
Human     5 LQEGAQLGENKPSTCSFSIERILGLDQKKDCVPLMKPHRPWAD---TCSSSGKDGNLCLHVPNPP 66

  Fly   194 S-------------DEDISDCE----SEPGIALKR-----KQRRCRTTFSASQLDELERAFERTQ 236
            |             :|..|..|    :...::|||     :.||.||.|:.:|::.||..|....
Human    67 SGISFPSVVDHPMPEERASKYENYFSASERLSLKRELSWYRGRRPRTAFTQNQIEVLENVFRVNC 131

  Fly   237 YPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQH 272
            ||.|..||:|||:.||.|.|||:||.||||:|::.|
Human   132 YPGIDIREDLAQKLNLEEDRIQIWFQNRRAKLKRSH 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 6/24 (25%)
Homeodomain 214..270 CDD:459649 30/55 (55%)
HESX1NP_003856.1 Homeodomain 109..165 CDD:459649 30/55 (55%)

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