DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and YOX1

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_013685.1 Gene:YOX1 / 854981 SGDID:S000004489 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:335 Identity:69/335 - (20%)
Similarity:110/335 - (32%) Gaps:106/335 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 NDMSSASGSPAGDGTKASSSCGSD-------VSGGHHN------NGKPSDEDISDCES------- 203
            ::.|||.|......|::.|:..|.       |...|.|      |.|..|..:|..::       
Yeast    71 HENSSAYGDDMLKHTQSDSALSSQLNSSQETVDESHENLLLTPLNSKKRDYSVSSKKNDILTPLS 135

  Fly   204 -------------------------------EPGI---ALKRKQRRCRTTFSASQLDELERAFER 234
                                           ||.|   .|.|::|| ||  |:.:|..|:..||:
Yeast   136 AAKSIIIPSASKEKRRAFAFITHSQETFPKKEPKIDNAPLARRKRR-RT--SSQELSILQAEFEK 197

  Fly   235 TQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHVAASSSLPSV 299
            ...|....|.|||:..::||..:|:||.|:|..:::|                 .:|.|.|...:
Yeast   198 CPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQ-----------------RIATSKSTTII 245

  Fly   300 VSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQFYN 364
            .:..|...||.:....|....           .|:|....::...||:.|| :..|||..|...|
Yeast   246 QTVSPPSPPLDVHATPLASRV-----------KADILRDGSSCSRSSSSSP-LENTPPRPHHSLN 298

  Fly   365 PSANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQLPP 429
            ..::|                    .|.:......:....:.....|...|||..|:.....:..
Yeast   299 RRSST--------------------PSIKRSQALTFHLNPQKKTLTPVKTSPNSRVNKLINSIDH 343

  Fly   430 TPNSLSAVVS 439
            :|:.....||
Yeast   344 SPSKAKRPVS 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076
Homeodomain 214..270 CDD:459649 21/55 (38%)
YOX1NP_013685.1 COG5576 126..267 CDD:227863 34/171 (20%)
Blue background indicates that the domain is not in the aligned region.

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