DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and HDG7

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001332093.1 Gene:HDG7 / 835293 AraportID:AT5G52170 Length:687 Species:Arabidopsis thaliana


Alignment Length:174 Identity:35/174 - (20%)
Similarity:51/174 - (29%) Gaps:72/174 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GTLGG------------SQTSYVKSAVTEQPSVAVYSSY--DHGAPVQDHRGHGDPSVSSPYVVV 119
            |.||.            |||.:..|...|...:::::.|  ....|..|....|.         :
plant   109 GALGAIPCVPPFTVETRSQTIFNYSVTLEMFFISLFARYCFRRVEPCADREARGQ---------L 164

  Fly   120 KTVPKFYYEKPRITGPTPAPSPYPVPRIPGVVPVRLAVDPNNHVNDG------------------ 166
            :|..|:        ..||...|||.....|      |.....:::||                  
plant   165 ETRNKW--------SQTPLREPYPQSEEEG------AAINGGYMSDGEETLCHIEHAPLDKYDFM 215

  Fly   167 ------QSEQH-----HSHQYYKIGQQLYKVQQEHGVTPTKLQT 199
                  ||..|     |.| .::.|::|     .|..||..|.|
plant   216 QCQQRAQSPGHAPAGGHPH-IHREGKEL-----AHMGTPQALAT 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 20/98 (20%)
Homeodomain 214..270 CDD:459649
HDG7NP_001332093.1 Homeodomain 61..113 CDD:459649 2/3 (67%)
START_ArGLABRA2_like 220..425 CDD:176884 12/40 (30%)
Blue background indicates that the domain is not in the aligned region.

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