DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and RHOXF2B

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001093155.1 Gene:RHOXF2B / 727940 HGNCID:33519 Length:288 Species:Homo sapiens


Alignment Length:307 Identity:73/307 - (23%)
Similarity:110/307 - (35%) Gaps:80/307 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 LIREGVCDRSTAPSVSA--ISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDV--SGGHHN 189
            |:...|.|......::|  :|.....::...|.......|:.||:..|::.:.|.:.  .||...
Human    14 LLSPAVDDEKELQDMNAMVLSLTEEVKEEEEDAQPEPEQGTAAGEKLKSAGAQGGEEKDGGGEEK 78

  Fly   190 NG-----------------KPSD---EDISDCESEPGIALKRKQRRCR------------TTFSA 222
            :|                 ..||   ||....|.|||....|.|....            ..|:.
Human    79 DGGGAGVPGHLWEGNLEGTSGSDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAFTP 143

  Fly   223 SQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAASV 287
            .||.|||..|:|.|:|..:.|..||:..|:||..:|:||.||||:.|:...:             
Human   144 LQLQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQRA------------- 195

  Fly   288 SHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGI 352
              :.|.:.||.:....|.|...|  .....|..:...:.|::..|:: |.|...||         
Human   196 --LMARNMLPFMAVGQPVMVTAA--EAITAPLFISGMRDDYFWDHSH-SSSLCFPM--------- 246

  Fly   353 TTTPPHHHQFYNPSANTASYIMP-------GENGNTTPTGNIIVSSY 392
               ||    |..||......::|       .|.|   |...:||.|:
Human   247 ---PP----FPPPSLPLPLMLLPPMPPAGQAEFG---PFPFVIVPSF 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 5/26 (19%)
Homeodomain 214..270 CDD:459649 23/67 (34%)
RHOXF2BNP_001093155.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..136 23/119 (19%)
Homeodomain 139..191 CDD:459649 23/51 (45%)
PRK02287 <183..>232 CDD:235024 12/65 (18%)
Nuclear localization signal. /evidence=ECO:0000250 186..195 3/8 (38%)

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