Protein Alignment prd and Isx

DIOPT Version :10

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_001387929.1
• Gene: Isx / 682968
• RGDID: 1592776
• Length: 242
• Species: Rattus norvegicus
• Alignment Length: 288
• Identity: 91/288 - (31%)
• Similarity: 122/288 - (42%)
• Gaps: 88/288 - (30%)

  Fly   101 IATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAP-------SVSAI-SRLVRGRDAPL 157
            :|.|.|:..||   :||               |.|:   ||       |:.|| .|....|:.|.
  Rat     1 MAGPTIQRDIE---KSS---------------GYCE---APEKLGLSFSIEAILKRPTERRNLPR 44

  Fly   158 DNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSA 222
            ...:.      .||..:.::| ||.:.       ||:       :.:|....|.| ||.||||:.
  Rat    45 PQSIG------GGDSRQTTTS-GSKLE-------KPT-------QDQPQEERKNK-RRVRTTFTT 87

  Fly   223 SQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGA---PGGA- 283
            .||.|||:.|..|.||||:.|.:||.|.||.|||:|:||.|:||:.|||..|.|..|   ||..
  Rat    88 EQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQEKSGSLSAPQQPGSCT 152

  Fly   284 -AASVSHVAAS-SSLPSVVSS-----VP------SMAPL------------AMMPGSLDPATVYQ 323
             |...:|:.|: ..||.:..|     ||      .|||:            |:.| .|.|.|...
  Rat   153 DAHCSAHIGATHRMLPPLSDSARFKLVPCPDSPCPMAPMGPAAPAWPSHPAALCP-YLHPPTPKP 216

  Fly   324 QQYDFYGSH---ANISVSAAAPMASSNL 348
            |    .|.|   |||....:.|..::.|
  Rat   217 Q----VGQHLCNANIRTGFSLPKQATLL 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076	15/60 (25%)
		Homeodomain	214..270	CDD:459649	32/55 (58%)
Isx	NP_001387929.1	Homeodomain	79..135	CDD:459649	32/55 (58%)