DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and CG34367

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster


Alignment Length:327 Identity:95/327 - (29%)
Similarity:123/327 - (37%) Gaps:70/327 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 ENRIEEYKRS--------SPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDMSS 163
            |..:|.|..|        .|...:|.|.|.|      |..:.|....:|.|..........|.::
  Fly    96 EEHVETYSLSPTLHKAAVEPKPKNWLISEDL------DVDSQPEDPKMSGLPTASITECTEDSNT 154

  Fly   164 ASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDEL 228
            ...:|  |.......|.|.....:..:..|.|..:          :..||||.||.|:..||:||
  Fly   155 PKLAP--DKPLLPEECVSPEPSRNREHCDPLDTSL----------VNTKQRRSRTNFTLDQLNEL 207

  Fly   229 ERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHVAAS 293
            ||.||.|.|||.:.||||:||..|:|||:||||.||||:.||....:..|...|   |.|...|:
  Fly   208 ERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVG---SRSPPIAT 269

  Fly   294 SSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPG--ITTTP 356
            ...|..|:...|:|.|........||             |..|.:..||..|...|.|  :|...
  Fly   270 PLEPCRVAPYVSLAALRSSSVPSHPA-------------AATSSNPQAPGVSGTSSSGKVVTVDS 321

  Fly   357 PHHH----------QFYNPSANTAS---------------YIMPGENGNTTPTGNIIVSSYETQL 396
            ||:|          ||.:..|..|:               |.....|| |.|.|...|..|...|
  Fly   322 PHNHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISVAAHQYAAAITNG-TVPAGLFSVPQYSINL 385

  Fly   397 GS 398
            .:
  Fly   386 AA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 13/54 (24%)
Homeodomain 214..270 CDD:459649 35/55 (64%)
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 35/55 (64%)
OAR 392..410 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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