DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and LOC5667704

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_001689344.3 Gene:LOC5667704 / 5667704 VectorBaseID:AGAMI1_007767 Length:357 Species:Anopheles gambiae


Alignment Length:583 Identity:152/583 - (26%)
Similarity:205/583 - (35%) Gaps:269/583 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MQDMNSGQ--GRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRY 83
            |:..|..|  |.||||||||:|||||||:.|::|||:|..|||||.||||||||||||||||.||
Mosquito     1 MEPENQAQQYGEVNQLGGVFVNGRPLPNSTRMRIVELARLGIRPCDISRQLRVSHGCVSKILARY 65

  Fly    84 QETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISR 148
            .|||||.||.|||||||:.||::...|.|.|:..||:|:||||::|:.:||||::..||||:|||
Mosquito    66 HETGSILPGAIGGSKPRVTTPKVVTYIRELKQKDPGIFAWEIRDRLLSDGVCDKNNVPSVSSISR 130

  Fly   149 LVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQ 213
            ::|.:   |.|                       ::..||:...|                    
Mosquito   131 ILRNK---LGN-----------------------LAHHHHHPHHP-------------------- 149

  Fly   214 RRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGG 278
                                  .:|...|                                    
Mosquito   150 ----------------------HHPHAGT------------------------------------ 156

  Fly   279 APGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPM 343
              ||..|...|.                           ||.:|...|..|            |.
Mosquito   157 --GGGGAHTPHA---------------------------PAHLYNSIYPSY------------PY 180

  Fly   344 ASSNL----------SPGITTTP---PHHHQFYNPSANTASYIMPG----------ENGNTTPTG 385
            |:|.|          ||....||   ||.|..: ||:::.:.|:..          .||. ||| 
Mosquito   181 AASTLKSEMSCGGSPSPPTGATPIRSPHAHCPW-PSSHSVTDILANVHHQATVAALRNGG-TPT- 242

  Fly   386 NIIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGAN 450
                              ::.|.|.|......:.:|...|         :...:|.|..:.:|..
Mosquito   243 ------------------SQCHTTPPPTSVGGQLMSGGGG---------NGGGNGGGAGNGNGTM 280

  Fly   451 SGADPSQSLANASAGSEELSAALKVESVDLIAASQSQLYGGWSSMQALRPNAPLSPEDSLNSTSS 515
            :||..|.:.|.|:|.:...:||         ||..:.                            
Mosquito   281 NGASASAAAAAAAAAAAAAAAA---------AAGNAA---------------------------- 308

  Fly   516 TSQALDVTAHQMFHPYQHTPQYASYPAPGHAHSHHGH-------PHAPHPH-AHPHPQYAGAH 570
                  |..||                  |.|.||.|       |.:|:.: .:.:.|..|.|
Mosquito   309 ------VAMHQ------------------HHHHHHHHQMQESVSPQSPNSYNYYMYLQSGGMH 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 84/128 (66%)
Homeodomain 214..270 CDD:459649 2/55 (4%)
LOC5667704XP_001689344.3 None

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