DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and alx1

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001038539.1 Gene:alx1 / 565176 ZFINID:ZDB-GENE-050419-191 Length:320 Species:Danio rerio


Alignment Length:342 Identity:90/342 - (26%)
Similarity:143/342 - (41%) Gaps:96/342 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 NRIEEYKRSSP------GMFSWEIREKLIREGVCD----------RSTAPSVSAISRLVRGRDAP 156
            :.::.|.::||      .|.|.:....:.|...||          :|...|:.|:......|.:|
Zfish    30 DNVQYYNKASPKCVQAFPMQSNDQHSSMDRSSPCDNQSSVTYCAPKSEESSLHAMENCCSLRVSP 94

  Fly   157 LDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFS 221
                  :.||....|..:....|.|:||..                         |:||.||||:
Zfish    95 ------ATSGPDKTDLDELGEKCDSNVSSS-------------------------KKRRHRTTFT 128

  Fly   222 ASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAAS 286
            ::||:|||:.|::|.|||:|.||:||.||.|||||:||||.||||:.||:...      |....:
Zfish   129 SAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAKWRKRERY------GQIQQA 187

  Fly   287 VSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHAN---ISVSAAAPMASSNL 348
            .||.||:..             ::|:|           :.|.|...:|   ...||.:.:.||.:
Zfish   188 KSHFAATYD-------------ISMLP-----------RTDSYSQISNNLWTGPSAGSSVVSSCM 228

  Fly   349 ----SPGITTTP-PHHHQFYNPSANTASYI-MPGENGNTTPTGNIIVSSYETQLGSVYGTETETH 407
                ||...|:| ||     :|.|....|: .|....|.....::.::::...  |:..:...:|
Zfish   229 IPRGSPPCVTSPYPH-----SPRAAEHGYVGFPNHQQNQFGVNHVSLNNFFAD--SLLASSANSH 286

  Fly   408 ---QTMPRNESPNESVS 421
               :|.|..|..:.|::
Zfish   287 AAFETKPEFERRSSSIA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 11/61 (18%)
Homeodomain 214..270 CDD:459649 36/55 (65%)
alx1NP_001038539.1 Homeodomain 121..177 CDD:459649 36/55 (65%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 180..320 31/161 (19%)
OAR 296..314 CDD:461067 2/8 (25%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 300..313 1/4 (25%)

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