DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prd and PAX7

DIOPT Version :9

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_002575.1 Gene:PAX7 / 5081 HGNCID:8621 Length:520 Species:Homo sapiens


Alignment Length:587 Identity:238/587 - (40%)
Similarity:294/587 - (50%) Gaps:158/587 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRP 91
            ||||||||||||||||||||:||.||||||..||||||||||||||||||||||.||||||||||
Human    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98

  Fly    92 GVIGGSKPR-IATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPS--VSAISRLVR-- 151
            |.||||||| :|||::|.:||||||.:|||||||||::|:::|.|||||.||  ||:|||::|  
Human    99 GAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIK 163

  Fly   152 -GRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRR 215
             |:....|.     :.....||.|.:......:.|   :.|...||. ||.||||.:.|||||||
Human   164 FGKKEEEDE-----ADKKEDDGEKKAKHSIDGILG---DKGNRLDEG-SDVESEPDLPLKRKQRR 219

  Fly   216 CRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAP 280
            .||||:|.||:|||:|||||.||||||||||||||.|||||:||||||||||.|||         
Human   220 SRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ--------- 275

  Fly   281 GGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMAS 345
                |..:.:||.:.|               :||...|.                          
Human   276 ----AGANQLAAFNHL---------------LPGGFPPT-------------------------- 295

  Fly   346 SNLSPGITTTPPHHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGTETETHQTM 410
                 |:.|.||              |.:|.             |:|.|...|..|..| .|:..
Human   296 -----GMPTLPP--------------YQLPD-------------STYPTTTISQDGGST-VHRPQ 327

  Fly   411 PRNESPNESVSSAFGQLPPT---PNSLSAVVSGAGVTSSSGA-NSGADPSQSLANASAGSEEL-- 469
            |               |||:   ...|:|..:.|..:|:.|| :|.:..|.|..|.:|.|..:  
Human   328 P---------------LPPSTMHQGGLAAAAAAADTSSAYGARHSFSSYSDSFMNPAAPSNHMNP 377

  Fly   470 -SAALKVESVDLIA------------ASQSQLYGGWSSMQALRPNA-----PLSPEDSLNSTSST 516
             |..|..:.:.::.            .|.|.|:||..|..::..:.     .:.|.|||    .|
Human   378 VSNGLSPQVMSILGNPSAVPPQPQADFSISPLHGGLDSATSISASCSQRADSIKPGDSL----PT 438

  Fly   517 SQALDVTAHQMFHPYQHTPQYASYPAPGHAHSHHGHPHAPHPHAHPHPQYAGAHPHYPPPSSSAH 581
            |||       ...|...|..|:..|..|:.:..:|......|.|.|.|..:      |.|.:|..
Human   439 SQA-------YCPPTYSTTGYSVDPVAGYQYGQYGQSECLVPWASPVPIPS------PTPRASCL 490

  Fly   582 FM 583
            ||
Human   491 FM 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 103/132 (78%)
Homeobox 217..269 CDD:278475 44/51 (86%)
PAX7NP_002575.1 paired box domain 34..164 102/129 (79%)
PAX 34..163 CDD:238076 102/128 (80%)
octapeptide 86..93 5/6 (83%)
paired homeodomain 217..275 48/57 (84%)
Homeobox 220..273 CDD:278475 44/52 (85%)
Pax7 347..385 CDD:289156 11/37 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..409 2/19 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I2843
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 331 1.000 Inparanoid score I2443
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1126858at2759
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 1 1.000 - - mtm8597
orthoMCL 1 0.900 - - OOG6_105365
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1205
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.870

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