DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prd and PAX5

DIOPT Version :9

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_057953.1 Gene:PAX5 / 5079 HGNCID:8619 Length:391 Species:Homo sapiens


Alignment Length:464 Identity:167/464 - (35%)
Similarity:223/464 - (48%) Gaps:104/464 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YSTMQDMNSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNR 82
            |.|.:...:|.|.||||||||:||||||:.:|.:|||:|..|:|||.||||||||||||||||.|
Human     7 YPTPRTSRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71

  Fly    83 YQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAIS 147
            |.|||||:|||||||||::|||::..:|.||||.:|.||:||||::|:.|.|||..|.||||:|:
Human    72 YYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSIN 136

  Fly   148 RLVRGR-DAPLDNDMSSASGSPAGDGTKAS-SSCGSDVSGGHHN--------------NGKPSDE 196
            |::|.: ..|.:..:.::|.|....|:... ||..:|.:|..::              |.:..||
Human   137 RIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSSYSISGILGITSPSADTNKRKRDE 201

  Fly   197 DISDC-----ESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEAR 256
            .|.:.     .|.||....|||.| ...|:..||:.|:|.|||..|.||:|..|..:....||..
Human   202 GIQESPVPNGHSLPGRDFLRKQMR-GDLFTQQQLEVLDRVFERQHYSDIFTTTEPIKPEQTTEYS 265

  Fly   257 IQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATV 321
            ..              .|::||.....|.     .||.:...:.||||.                
Human   266 AM--------------ASLAGGLDDMKAN-----LASPTPADIGSSVPG---------------- 295

  Fly   322 YQQQYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQFYNPSANTASYIMPGENGNTTPTGN 386
             .|.|         .:.....:||:.| ||.   |||     .|.|...||..|      |.||.
Human   296 -PQSY---------PIVTGRDLASTTL-PGY---PPH-----VPPAGQGSYSAP------TLTGM 335

  Fly   387 IIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGANS 451
            :..|.:.   ||.|     :|   |:..|.|:|...      |.|..|     |:....|:.|..
Human   336 VPGSEFS---GSPY-----SH---PQYSSYNDSWRF------PNPGLL-----GSPYYYSAAARG 378

  Fly   452 GADPSQSLA 460
            .|.|:.:.|
Human   379 AAPPAAATA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 85/127 (67%)
Homeobox 217..269 CDD:278475 15/51 (29%)
PAX5NP_057953.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 4/13 (31%)
PAX 16..140 CDD:128645 84/123 (68%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 41/55 (75%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 25/47 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..218 7/35 (20%)
Pax2_C 279..389 CDD:403565 43/177 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.