DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and PAX2

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_003981.3 Gene:PAX2 / 5076 HGNCID:8616 Length:432 Species:Homo sapiens


Alignment Length:471 Identity:158/471 - (33%)
Similarity:214/471 - (45%) Gaps:153/471 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 MNSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGS 88
            |:.|.|.||||||||:||||||:.:|.:|||:|..|:|||.||||||||||||||||.||.||||
Human    13 MHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGS 77

  Fly    89 IRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVR-- 151
            |:|||||||||::|||::.::|.||||.:|.||:||||::|:.||:||..|.||||:|:|::|  
Human    78 IKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTK 142

  Fly   152 --------------GRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNG----------- 191
                          |..||....:.|.:..|.       ||..:|..|.:..||           
Human   143 VQQPFHPTPDGAGTGVTAPGHTIVPSTASPPV-------SSASNDPVGSYSINGILGIPRSNGEK 200

  Fly   192 KPSDE-----------------------DISD-----CESEPGIALKRKQRRCRTTFSASQLDEL 228
            :..||                       |:|:     .:|:.|:...||..|. .||:..||:.|
Human   201 RKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEGSVPNGDSQSGVDSLRKHLRA-DTFTQQQLEAL 264

  Fly   229 ERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHVAAS 293
            :|.|||..|||::...|                                           |:.:.
Human   265 DRVFERPSYPDVFQASE-------------------------------------------HIKSE 286

  Fly   294 S----SLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAA-PMASSNLSPGIT 353
            .    |||            |:.|| ||              ....|:||:. |...||:| |..
Human   287 QGNEYSLP------------ALTPG-LD--------------EVKSSLSASTNPELGSNVS-GTQ 323

  Fly   354 TTPPHHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSYETQ--LGSVYGTE-TETHQTMPRNES 415
            |.|      .....:.||..:||...:..|||.   .||.|.  .|.|.|:| :....:.|:..:
Human   324 TYP------VVTGRDMASTTLPGYPPHVPPTGQ---GSYPTSTLAGMVPGSEFSGNPYSHPQYTA 379

  Fly   416 PNES--VSSAFGQLPP 429
            .||:  .|:....:||
Human   380 YNEAWRFSNPALLMPP 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 86/142 (61%)
Homeodomain 214..270 CDD:459649 14/55 (25%)
PAX2NP_003981.3 PAX 16..140 CDD:128645 84/123 (68%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 41/55 (75%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 25/47 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..325 8/21 (38%)
Pax2_C 305..>390 CDD:463563 28/94 (30%)

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