Protein Alignment prd and abd-A

DIOPT Version :10

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 135
• Identity: 37/135 - (27%)
• Similarity: 56/135 - (41%)
• Gaps: 21/135 - (15%)

  Fly   161 MSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKR-------------- 211
            :|:||....|..: ..::|....||.....|......|:|....|.:.|..
  Fly   327 VSAASAGAIGVDS-LGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDF 390

  Fly   212 ------KQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRK 270
                  .:||.|.|::..|..|||:.|....|.....|.|:|....|||.:|::||.|||.:|:|
  Fly   391 NGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455

  Fly   271 QHTSV 275
            :..:|
  Fly   456 ELRAV 460

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076
		Homeodomain	214..270	CDD:459649	23/55 (42%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	23/55 (42%)
		Abdominal-A	456..478	CDD:403567	1/5 (20%)