Protein Alignment prd and Poxm

DIOPT Version :10

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_001036687.1
• Gene: Poxm / 40990
• FlyBaseID: FBgn0003129
• Length: 370
• Species: Drosophila melanogaster
• Alignment Length: 542
• Identity: 156/542 - (28%)
• Similarity: 207/542 - (38%)
• Gaps: 211/542 - (38%)

  Fly    29 GRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGV 93
            |.||||||||:|||||||..|::|||:|..|||||.||||||||||||||||.||.|||||.||.
  Fly    11 GEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGSILPGA 75

  Fly    94 IGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGRDAPLD 158
            |||||||:.||::.|.|.|.|:..||:|:||||::|:.||:||::..||||:|||::|.:...|.
  Fly    76 IGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLGSLG 140

  Fly   159 NDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSAS 223
            :  ....|:..|.|  :||..||..|.|..|||..:..:|
  Fly   141 H--QHTPGTVMGSG--SSSGGGSVSSNGGQNNGTSASNNI------------------------- 176

  Fly   224 QLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGG------ 282
                                       ||:..                      |.|||
  Fly   177 ---------------------------NLSNL----------------------GNPGGGPHHPH 192

  Fly   283 ---------AAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVS 338
                     ||||..||.|.:.                                   :||::
  Fly   193 HHHHHQSAAAAASAHHVHAHAH-----------------------------------AHAHL--- 219

  Fly   339 AAAPMASSNLSPGITTTPPHHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGTE 403
                                ::..|.|.:..|:|.|....|:.:|
  Fly   220 --------------------YNSIYQPYSAAAAYSMKTPCGSPSP-------------------- 244

  Fly   404 TETHQTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGANSGADPSQSLANASAGSEE 468
                   |:......||        |.|:.|.:|.:.|.......::|.:|   .||:..|
  Fly   245 -------PQGAGGQGSV--------PHPHQLRSVAAAAAAAHWPSSHSVSD---ILAHHQA---- 287

  Fly   469 LSAALKVESVDLIAASQSQL-YGGWSSMQALRPNAPLSPEDSLNSTSSTSQALDVT--AHQMFHP 530
                     |.|.|:.|..: .||...|.:.....|::| ..:..|:.....||..  |.|. .|
  Fly   288 ---------VALRASCQVGVGVGGMGGMGSTVSPLPMTP-SPVAGTAGGQPLLDCEGGAGQQ-SP 341

  Fly   531 YQHTPQYASYPAPGHAHSHHGH 552
            |    .|..|...|..|.||.|
  Fly   342 Y----NYYMYFQNGGMHHHHHH 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076	84/124 (68%)
		Homeodomain	214..270	CDD:459649	2/55 (4%)
Poxm	NP_001036687.1	PAX	10..133	CDD:128645	83/121 (69%)