Protein Alignment prd and Scr

DIOPT Version :10

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 440
• Identity: 91/440 - (20%)
• Similarity: 148/440 - (33%)
• Gaps: 140/440 - (31%)

  Fly    67 RQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIR 131
            :|.:.:..|  |..|.....|....|.:.||.....:....|...:...|...:.:.:|..||
  Fly   159 QQQQANISC--KYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKL-- 219

  Fly   132 EGVCDRSTAPSVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGG--------HH 188
                    :|| |.:..:.|..:..:.....:|:.:.||.....|   ||.||||        |.
  Fly   220 --------SPS-SVVESVARSLNKGVLGGSLAAAAAAAGLNNNHS---GSGVSGGPGNVNVPMHS 272

  Fly   189 NNGKPSDEDISDCESEPGIA----------------LKR------------KQRRCRTTFSASQL 225
            ..|..||.: ||..:|.|.:                :||            :.:|.||:::..|.
  Fly   273 PGGGDSDSE-SDSGNEAGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQT 336

  Fly   226 DELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHV 290
            .|||:.|...:|.....|.|:|....|||.:|::||.|||.:.:|:|
  Fly   337 LELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH------------------ 383

  Fly   291 AASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSH-ANISVSAAAPMASSNLSPGITT 354
                          .||.:.::|..:.|......|:|.:.|. |::|. .|...:.
  Fly   384 --------------KMASMNIVPYHMGPYGHPYHQFDIHPSQFAHLSAXDAWHFSG--------- 425

  Fly   355 TPPHHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNESPNES 419
            |. ..:|.|.....||:             .....|.|::|.|.
  Fly   426 TGXRLNQLYQEPYQTAA-------------AASAASGYQSQDGG--------------------- 456

  Fly   420 VSSAFGQLPPTPNSLSAVVSGAGVTSS--SGANSGADPSQSLANASAGSE 467
                     |.......|..|||...|  :|.::|:.|:...|:|::.|:
  Fly   457 ---------PIGGGSVGVGGGAGGPGSLANGGSNGSGPNSLFASAASSSQ 497

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076	17/86 (20%)
		Homeodomain	214..270	CDD:459649	21/55 (38%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	21/55 (38%)