DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and lab

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:359 Identity:83/359 - (23%)
Similarity:122/359 - (33%) Gaps:110/359 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 LDPATVYQQQYDFYGSHANI-----SVSAAAPMASSNLSPGITTTPPH-------HHQFYNPSAN 368
            :|.:::|......:..|||.     :.:|:|..|||..:|  ....||       .||.......
  Fly     2 MDVSSMYGNHPHHHHPHANAYDGYSTTTASAANASSYFAP--QQHQPHLQLQQQQQHQHLQQPQQ 64

  Fly   369 TASYIMPGENG-NTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQLPPTPN 432
            ..:|     || .::..||.    |..|...:....|.:||.:.:::...::...   ||.|..:
  Fly    65 HLTY-----NGYESSSPGNY----YPQQQAQLTPPPTSSHQVVQQHQQQQQAQQQ---QLYPHSH 117

  Fly   433 SLSAVVSGAGVTSSS-----------GANSGAD----------------------PSQS----LA 460
            ..|...:..|:|:|:           .::|.||                      ||.|    .|
  Fly   118 LFSPSAAEYGITTSTTTGNPGTPLHPSSHSPADSYYESDSVHSYYATAAVATVAPPSNSSPITAA 182

  Fly   461 NASAGSEELSAALKVESVDLIAASQSQLYGGWSSM----QALRP----------------NAPLS 505
            ||||.|   :...:.:...:|::....:|.....|    ||..|                :|..:
  Fly   183 NASATS---NTQQQQQQAAIISSENGMMYTNLDCMYPTAQAQAPVHGYAGQIEEKYAAVLHASYA 244

  Fly   506 PEDSLNSTSSTSQALDVTAHQMFHPYQHTPQYASYPAPG------HAHSHHGHPH------APHP 558
            |...|.......|  ..|..||:|..||..  .||....      |||.|||.||      |.:|
  Fly   245 PGMVLEDQDPMMQ--QATQSQMWHHQQHLA--GSYALDAMDSLGMHAHMHHGLPHGHLGNLANNP 305

  Fly   559 H-AHPHPQYAGAHPHYPPPSSSAHFMPQNFNAAA 591
            | ..|..|.....||..|..      |||.:.||
  Fly   306 HQQQPQVQQQQQQPHQQPQH------PQNQSPAA 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076
Homeodomain 214..270 CDD:459649
labNP_476613.1 Homeodomain 505..558 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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