Protein Alignment prd and phox2a

DIOPT Version :10

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_996953.2
• Gene: phox2a / 404602
• ZFINID: ZDB-GENE-000223-14
• Length: 280
• Species: Danio rerio
• Alignment Length: 323
• Identity: 103/323 - (31%)
• Similarity: 132/323 - (40%)
• Gaps: 102/323 - (31%)

  Fly   158 DNDMSSASGSPAGDGTKASSSCG---SDVSGGHHNNGKPSDEDISDC------ESEP-------- 205
            |:.|::...|...|....|.|.|   :.:..|..:....:....:.|      |.:|
Zfish    13 DSCMAAMEASAYADFNSCSQSNGFQYNPIRSGFSSGPACAPLATASCTLGALREHQPAPYSTVPY 77

  Fly   206 -------GIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSN 263
                   |:..||||||.||||::|||.||||.|..|.|||||||||||.:.:|||||:||||.|
Zfish    78 KFFSDASGLNEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQN 142

  Fly   264 RRARLRKQH-------TSVSGGAPGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATV 321
            |||:.|||.       :|.|||.....|.|.|.  ...|..|..|..|.
Zfish   143 RRAKFRKQERAANSKASSSSGGKKPSDARSSSE--DDESKESTCSPTPD---------------- 189

  Fly   322 YQQQYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQFYNPSANTASYIMPGENGNTTPTGN 386
                     |.||:|    :|.|.|:|||             :|:...||...|   .:.:|.
Zfish   190 ---------STANMS----SPGARSSLSP-------------SPAPGPASTFSP---ASISPA-- 223

  Fly   387 IIVSSYETQLGSVYGTETETH---QTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSS 446
             :.||....|||  ||...||   |.:.:...|.:|:|..|                |||.||
Zfish   224 -LKSSPWPSLGS--GTPGPTHTHTQELLKAWQPADSMSGPF----------------AGVLSS 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076
		Homeodomain	214..270	CDD:459649	39/55 (71%)
phox2a	NP_996953.2	Homeodomain	93..149	CDD:459649	39/55 (71%)