DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and PHOX2A

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001412025.1 Gene:PHOX2A / 401 HGNCID:691 Length:312 Species:Homo sapiens


Alignment Length:247 Identity:81/247 - (32%)
Similarity:100/247 - (40%) Gaps:65/247 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 EP-GIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARI---------- 257
            || |:..||||||.||||:::||.||||.|..|.|||||||||||.:.:|||||:          
Human    80 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQDLTRALRPR 144

  Fly   258 ------------------QVWFSNRRARLRKQHTSVSG-GAPGGAAASVSHVAASS----SLPSV 299
                              ||||.||||:.|||..:.|. ||.|.|.|.......||    |..|.
Human   145 ADPVRSPTLVQADWPLCPQVWFQNRRAKFRKQERAASAKGAAGAAGAKKGEARCSSEDDDSKEST 209

  Fly   300 VSSVP---SMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQ 361
            .|..|   :..|....||...|               .:|.|.......|...||....|.....
Human   210 CSPTPDSTASLPPPPAPGLASP---------------RLSPSPLPVALGSGPGPGPGPQPLKGAL 259

  Fly   362 FY--------NPSANTASYI---MPGENGNTTPTGNIIVSSYETQLGSVYGT 402
            :.        .|.|..|..:   .|.|:|....:|  ::||:..:.|....|
Human   260 WAGVAGGGGGGPGAGAAELLKAWQPAESGPGPFSG--VLSSFHRKPGPALKT 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076
Homeodomain 214..270 CDD:459649 38/83 (46%)
PHOX2ANP_001412025.1 Homeodomain 91..175 CDD:459649 38/83 (46%)
Blue background indicates that the domain is not in the aligned region.

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