DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prd and eyg

DIOPT Version :9

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001014582.1 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:585 Identity:167/585 - (28%)
Similarity:244/585 - (41%) Gaps:189/585 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GIRPCVISRQLRVSHGCVSKILNRYQETGSIR-PGVIGGSKPRIATPEIENRIEEYKRSSPGMFS 122
            |:|...|::.:....|.|||:|      ||:| ||:||||||::|||.:.::||:|||.:|.:|:
  Fly   130 GLRGYDIAQHMLTQQGAVSKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFA 188

  Fly   123 WEIREKLIREGVCDRSTAPSVSAISRLVRGRDA-----------------PLDNDMSSASGSPAG 170
            |||||:||.||||..:||||||:|:|::|.|.|                 |..:...|.:..|||
  Fly   189 WEIRERLISEGVCTNATAPSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAG 253

  Fly   171 D----------------------------GTKAS----SSCGS--------------------DV 183
            :                            .:.||    |:|||                    ..
  Fly   254 NVPGGQGVPPPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISP 318

  Fly   184 SGGHHNNGKPSDE------DISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYT 242
            ..|.|:..:.:||      |..|.:.||      |.||.|||||..||:|||:.|:::.||.:.|
  Fly   319 GSGSHDTLESADENRHIDSDYLDDDDEP------KFRRNRTTFSPEQLEELEKEFDKSHYPCVST 377

  Fly   243 REELAQRTNLTEARIQVWFSNRRARLRKQ-----------------HTSVSGGAPGGAAASVSHV 290
            ||.|:.||:|:|||:|||||||||:.|:.                 |:..|..||          
  Fly   378 RERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSNDAP---------- 432

  Fly   291 AASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTT 355
             |||..||..||..:.||:|.:|..       ||.....|.|     |...|..|..|.|  ...
  Fly   433 -ASSPTPSNHSSASTSAPVAPVPPP-------QQPLPLCGDH-----SPQGPPPSVLLHP--LHG 482

  Fly   356 PP----HHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSY----ETQLGSVYGTETETHQTMPR 412
            ||    |||..:.|               |.|....::|.|    :.|....:..:.:.|....:
  Fly   483 PPGGHHHHHPLHLP---------------THPAALQLLSHYHQQQQQQQQQQHQQQQQQHHQQQQ 532

  Fly   413 NESP---NESVS--------SAFGQLPPTPNSLS--------AVVS--------------GAGVT 444
            ..||   |.:.:        |||..|..:|::.:        ||.:              .||..
  Fly   533 QLSPSGCNPAANHLSMGGERSAFRSLVSSPSAAAFLGLARQYAVAASLTVAEEQRSRLHYSAGGL 597

  Fly   445 SSSGANSGADPSQSLANASAGSEELSAALKVESVDLIAASQSQLYGGWSSMQALRPNAPLSPEDS 509
            .|.|..:|.:.:.:.:..|..:.:.|::...|.:::...|..::.   ||.......|.||..|:
  Fly   598 GSGGEGTGPNTNTTQSGGSTMTVDNSSSDSDEEINVHDDSDGEIE---SSAATAAKVARLSSSDA 659

  Fly   510  509
              Fly   660  659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 49/95 (52%)
Homeobox 217..269 CDD:278475 32/51 (63%)
eygNP_001014582.1 HTH 120..217 CDD:304362 48/92 (52%)
Homeobox 352..404 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450814
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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