DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and eyg

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:585 Identity:167/585 - (28%)
Similarity:244/585 - (41%) Gaps:189/585 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GIRPCVISRQLRVSHGCVSKILNRYQETGSIR-PGVIGGSKPRIATPEIENRIEEYKRSSPGMFS 122
            |:|...|::.:....|.|||:|      ||:| ||:||||||::|||.:.::||:|||.:|.:|:
  Fly   130 GLRGYDIAQHMLTQQGAVSKLL------GSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFA 188

  Fly   123 WEIREKLIREGVCDRSTAPSVSAISRLVRGRDA-----------------PLDNDMSSASGSPAG 170
            |||||:||.||||..:||||||:|:|::|.|.|                 |..:...|.:..|||
  Fly   189 WEIRERLISEGVCTNATAPSVSSINRILRNRAAERVATEFARTAAYGLYPPPPHPYGSFTWHPAG 253

  Fly   171 D----------------------------GTKAS----SSCGS--------------------DV 183
            :                            .:.||    |:|||                    ..
  Fly   254 NVPGGQGVPPPPPPSALWSVAAPTLANLPPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISP 318

  Fly   184 SGGHHNNGKPSDE------DISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYT 242
            ..|.|:..:.:||      |..|.:.||      |.||.|||||..||:|||:.|:::.||.:.|
  Fly   319 GSGSHDTLESADENRHIDSDYLDDDDEP------KFRRNRTTFSPEQLEELEKEFDKSHYPCVST 377

  Fly   243 REELAQRTNLTEARIQVWFSNRRARLRKQ-----------------HTSVSGGAPGGAAASVSHV 290
            ||.|:.||:|:|||:|||||||||:.|:.                 |:..|..||          
  Fly   378 RERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRSSPANPLHSQQSNDAP---------- 432

  Fly   291 AASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTT 355
             |||..||..||..:.||:|.:|..       ||.....|.|     |...|..|..|.|  ...
  Fly   433 -ASSPTPSNHSSASTSAPVAPVPPP-------QQPLPLCGDH-----SPQGPPPSVLLHP--LHG 482

  Fly   356 PP----HHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSY----ETQLGSVYGTETETHQTMPR 412
            ||    |||..:.|               |.|....::|.|    :.|....:..:.:.|....:
  Fly   483 PPGGHHHHHPLHLP---------------THPAALQLLSHYHQQQQQQQQQQHQQQQQQHHQQQQ 532

  Fly   413 NESP---NESVS--------SAFGQLPPTPNSLS--------AVVS--------------GAGVT 444
            ..||   |.:.:        |||..|..:|::.:        ||.:              .||..
  Fly   533 QLSPSGCNPAANHLSMGGERSAFRSLVSSPSAAAFLGLARQYAVAASLTVAEEQRSRLHYSAGGL 597

  Fly   445 SSSGANSGADPSQSLANASAGSEELSAALKVESVDLIAASQSQLYGGWSSMQALRPNAPLSPEDS 509
            .|.|..:|.:.:.:.:..|..:.:.|::...|.:::...|..::.   ||.......|.||..|:
  Fly   598 GSGGEGTGPNTNTTQSGGSTMTVDNSSSDSDEEINVHDDSDGEIE---SSAATAAKVARLSSSDA 659

  Fly   510  509
              Fly   660  659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 49/95 (52%)
Homeodomain 214..270 CDD:459649 34/55 (62%)
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 48/92 (52%)
Homeodomain 349..405 CDD:459649 34/55 (62%)

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