Protein Alignment prd and Gsc

DIOPT Version :10

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 324
• Identity: 79/324 - (24%)
• Similarity: 113/324 - (34%)
• Gaps: 110/324 - (33%)

  Fly    82 RYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSV-SA 145
            ::|::.|..|....||:..:..      :||.:|......|....:.::........||||. |.
  Fly   128 QHQQSQSQTPSSDDGSQSGVTI------LEEERRGGAAAASLFTIDSILGSRQQGGGTAPSQGSH 186

  Fly   146 ISR---------------LVR-GRDAPL---DNDMSSASGSP----------------------- 168
            ||.               |.| |.::|.   .|..|||:.||
  Fly   187 ISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPIRPQRVPAMLQHPGLHLGHLAAA 251

  Fly   169 AGDGTKASSS--------------------------CGSDVSGG-----------HHNNGKP--- 193
            |..|..||.|                          ..:.|||.           ||.:|.|
  Fly   252 AASGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHP 316

  Fly   194 -------SDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTN 251
                   ....:|.....|.   .:::||.||.|:..||::||..|::|.|||:..||:||.:.:
  Fly   317 HLGAHHHGQHHLSHLGHGPP---PKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVD 378

  Fly   252 LTEARIQVWFSNRRA-----------RLRKQHTSVSGGAPGGAAASVSHVAASSSLPSVVSSVP 304
            |.|.|::|||.||||           ||||......|....|...|.|...:|:...|:....|
  Fly   379 LKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCP 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076	19/88 (22%)
		Homeodomain	214..270	CDD:459649	30/66 (45%)
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	28/55 (51%)