Protein Alignment prd and pax6a

DIOPT Version :9

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: XP_009296153.1
• Gene: pax6a / 30567
• ZFINID: ZDB-GENE-990415-200
• Length: 459
• Species: Danio rerio
• Alignment Length: 465
• Identity: 177/465 - (38%)
• Similarity: 232/465 - (49%)
• Gaps: 96/465 - (20%)

  Fly    19 STMQD-----MNSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLR-------- 70
            |.||:     .|.|...||||||||:||||||::.|.||||:|..|.|||.|||.|:
Zfish    18 SMMQNKVYDICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQ 82

  Fly    71 ------VSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKL 129
                  ||:|||||||.||.|||||||..|||||||:||||:..:|.:|||..|.:|:||||::|
Zfish    83 VLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRL 147

  Fly   130 IREGVCDRSTAPSVSAISRLVR---------GRDAPLDN------------------DMSSASGS 167
            :.||||.....||||:|:|::|         |.|...:.                  ..:|..|.
Zfish   148 LSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQ 212

  Fly   168 PAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAF 232
            |..||      |.....||.:.|...|:.:.|| |::..:.||||.:|.||:|:..|::.||:.|
Zfish   213 PNQDG------CQQSDGGGENTNSISSNGEDSD-ETQMRLQLKRKLQRNRTSFTQEQIEALEKEF 270

  Fly   233 ERTQYPDIYTREELAQRTNLTEARIQVWFSNRRA------RLRKQHTSVSGGAPGGAAASVSHVA 291
            |||.|||::.||.||.:.:|.|||||||||||||      :||.|....|.        |.||:.
Zfish   271 ERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN--------SSSHIP 327

  Fly   292 ASSSL-PSVVSSVPS-MAPLAMMPGSL--DPATVYQQQYDFYGSHANISVSAAAPMASSN----- 347
            .|||. .||...:|. ..|::...||:  ...|.....|.......:.:::...||..|.
Zfish   328 ISSSFSTSVYQPIPQPTTPVSFTSGSMLGRSDTALTNTYSALPPMPSFTMANNLPMQPSQTSSYS 392

  Fly   348 ----LSPGI------TTTPPHHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGT 402
                .||.:      |.||||.....|..:..||        .||.||  ::|...:....|.|:
Zfish   393 CMLPTSPSVNGRSYDTYTPPHMQAHMNSQSMAAS--------GTTSTG--LISPGVSVPVQVPGS 447

  Fly   403 ETETHQTMPR 412
            |.:..|..||
Zfish   448 EPDMSQYWPR 457

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076	81/149 (54%)
		Homeobox	217..269	CDD:278475	31/57 (54%)
pax6a	XP_009296153.1	PAX	31..169	CDD:128645	79/137 (58%)
		Homeobox	255..307	CDD:306543	31/51 (61%)
		Retinal	341..>459	CDD:330657	30/127 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910