Protein Alignment prd and rx3

DIOPT Version :10

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_571302.1
• Gene: rx3 / 30474
• ZFINID: ZDB-GENE-990415-238
• Length: 292
• Species: Danio rerio
• Alignment Length: 226
• Identity: 78/226 - (34%)
• Similarity: 107/226 - (47%)
• Gaps: 63/226 - (27%)

  Fly   167 SPAGDGTK-ASSSCGS---------DVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFS 221
            ||..|..| ....|.|         |..|     ||.||::      .|    |:|.||.||||:
Zfish    65 SPKKDSNKHFDGVCRSTVMVSPDLPDADG-----GKLSDDE------NP----KKKHRRNRTTFT 114

  Fly   222 ASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAAS 286
            ..||.|||||||::.|||:|:|||||.:.||.|.|:||||.||||:.|:|.           ...
Zfish   115 TFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQE-----------KLE 168

  Fly   287 VSHVAASSSLPSVVSSVPSMAPLAMMPG-SLDPATVYQQQYDFYGSHANISVSAAAPMAS--SNL 348
            ||.:....   |.:.|:|...||::..| .|:|...           ..||.| ::|:.|  |.:
Zfish   169 VSSIKLQE---SSMLSIPRSGPLSLGSGLPLEPWLT-----------GPISTS-SSPLQSLPSFI 218

  Fly   349 SP----GITTTPPHHHQFYNPSANTASYIMP 375
            :|    ..:.|||   ||.  |::|.::.:|
Zfish   219 TPQQAVPASYTPP---QFL--SSSTLNHSLP 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076
		Homeodomain	214..270	CDD:459649	36/55 (65%)
rx3	NP_571302.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..27
		Octapeptide motif	32..39
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	53..72		3/6 (50%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	85..107		9/36 (25%)
		Homeodomain	107..163	CDD:459649	36/55 (65%)
		OAR	268..284	CDD:461067
		OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138	272..285
		Nuclear localization signal. /evidence=ECO:0000255	278..282