Protein Alignment prd and Shox2

DIOPT Version :9

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_038693.1
• Gene: Shox2 / 20429
• MGIID: 1201673
• Length: 331
• Species: Mus musculus
• Alignment Length: 391
• Identity: 104/391 - (26%)
• Similarity: 146/391 - (37%)
• Gaps: 111/391 - (28%)

  Fly   121 FSWEIREKLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDMSS-----------ASGSPAGDGTK 174
            |..:::||  :|.:..|....|.........|...|..:|.||           |.|...|.|..
Mouse    12 FDQKVKEK--KEAITYREVLESGPLRGAKEPGCVEPGRDDRSSPAVRAAGGGGGAGGGGGGGGGG 74

  Fly   175 ASSSCGSDVSGGHHNNGKPSDE-DISDCE--SEPGI------------------------ALKRK 212
            ...:.|....||......|..| |:...|  .|||.                        ..|.|
Mouse    75 GGGAGGGGAGGGAGGGRSPVRELDMGAAERSREPGSPRLTEVSPELKDRKDDAKGMEDEGQTKIK 139

  Fly   213 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSG 277
            |||.||.|:..||:||||.|:.|.|||.:.||||:||..|:|||:||||.||||:.|||...:..
Mouse   140 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHK 204

  Fly   278 GAPGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAP 342
            |...|||   |...|....|.|  :|.::    .||        :||.     ||.|::..:...
Mouse   205 GVLIGAA---SQFEACRVAPYV--NVGAL----RMP--------FQQD-----SHCNVTPLSFQV 247

  Fly   343 MASSNLSPGITTTPPHHHQFYNPSANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGTETETH 407
            .|...|...:...  |||...:.:|:....:.|     ..|.|
Mouse   248 QAQLQLDSAVAHA--HHHLHPHLAAHAPYMMFP-----APPFG---------------------- 283

  Fly   408 QTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGANSGADPSQSLANASAGSEELSAA 472
              :|......:|.|:|            :||:.|....::..||      |:|:....:::.:||
Mouse   284 --LPLATLAADSASAA------------SVVAAAAAAKTTSKNS------SIADLRLKAKKHAAA 328

  Fly   473 L 473
            |
Mouse   329 L 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076	7/32 (22%)
		Homeobox	217..269	CDD:278475	32/51 (63%)
Shox2	NP_038693.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..20		3/9 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	26..140		22/113 (19%)
		Homeobox	143..197	CDD:395001	32/53 (60%)
		OAR	311..327	CDD:397759	4/21 (19%)
		OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138	313..326		3/18 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910