Protein Alignment prd and unc-42

DIOPT Version :10

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_001263845.1
• Gene: unc-42 / 192081
• WormBaseID: WBGene00006778
• Length: 279
• Species: Caenorhabditis elegans
• Alignment Length: 305
• Identity: 83/305 - (27%)
• Similarity: 119/305 - (39%)
• Gaps: 93/305 - (30%)

  Fly   156 PLDNDMSSAS----GSPAGDGT--------KASSSCGSDVSGGHHNNG------KPSDEDISDCE 202
            |...|..|||    ..|:.||.        ...|..||.::|..:...      :|..|.::
 Worm    37 PSSLDTVSASLRPISDPSSDGAFKKIKTEGLGGSVFGSSIAGVTNTPARLCSLERPESERLN--- 98

  Fly   203 SEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 267
                     .:||.||||:..||.||:.||:::.|||||.|||||:.|.|.||||||||.||||:
 Worm    99 ---------SRRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQNRRAK 154

  Fly   268 LRKQHTSVSGGAPGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSH 332
            .||....::      .|.:..|...|:...:::..       .|.|.:|:....:.|.|.
 Worm   155 HRKHEKQLN------KAINPPHSFLSNPANTLMRQ-------GMYPAALNRDGFWYQSYQ----- 201

  Fly   333 ANISVSAAAPMASSNLSPGITTTPPHHHQFYNPSANTASYIMPGENGN------------TTPTG 385
                    .||      |..|.:|.:.:.|.||.||....|...:..:            |||:
 Worm   202 --------RPM------PYPTASPSYSNSFTNPIANFGHSITSFQADDEFYQKSLALRMTTTPS- 251

  Fly   386 NIIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQLPPT 430
               .::..|.|.::     ...||.|...|.|          ||:
 Worm   252 ---AATAATSLANI-----NYQQTQPSEASTN----------PPS 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076
		Homeodomain	214..270	CDD:459649	36/55 (65%)
unc-42	NP_001263845.1	Homeodomain	101..157	CDD:459649	36/55 (65%)