DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and Prop1

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_032962.1 Gene:Prop1 / 19127 MGIID:109330 Length:223 Species:Mus musculus


Alignment Length:291 Identity:82/291 - (28%)
Similarity:113/291 - (38%) Gaps:101/291 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 IEEYKRSSPGMFSWEIREKLIREGVCDRS-TAPSVSA---ISRLVRGRDAPLDNDMSSASGSPAG 170
            :|..:||.        :||..:...|.|| ..|.|::   ||.:.|..:|     ....||:..|
Mouse     1 MEAQRRSH--------QEKQTKGHACGRSLPEPRVASGTLISTVDRSSEA-----YRRLSGTELG 52

  Fly   171 DGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERT 235
                ....|        ...|:|                 ..:||.||||:.:||::||.||.|.
Mouse    53 ----RPKLC--------PQRGRP-----------------HSRRRHRTTFNPAQLEQLESAFGRN 88

  Fly   236 QYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHVAA-------- 292
            |||||:.||.|||.|.|:||||||||.||||:.|||..|:        ...::|::.        
Mouse    89 QYPDIWAREGLAQDTGLSEARIQVWFQNRRAKQRKQERSL--------LQPIAHLSTATFSGFLP 145

  Fly   293 -SSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTTP 356
             ||:.|....:.|..||....|               |........|.||.:|          .|
Mouse   146 ESSAYPYTYGTPPPPAPCFPHP---------------YSHSLPSQPSTAASLA----------LP 185

  Fly   357 PHHHQFYNPSANTASYIMPGENGNTTPTGNI 387
            |....:| |:.:.|            |||::
Mouse   186 PQPEDWY-PTLHPA------------PTGHL 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 13/47 (28%)
Homeodomain 214..270 CDD:459649 37/55 (67%)
Prop1NP_032962.1 Homeodomain 67..123 CDD:459649 37/55 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..223 13/59 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 21/109 (19%)

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