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Protein Alignment prd and npax-2
DIOPT Version :9
Sequence 1: | NP_723721.1 |
Gene: | prd / 34629 |
FlyBaseID: | FBgn0003145 |
Length: | 613 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_508396.3 |
Gene: | npax-2 / 185967 |
WormBaseID: | WBGene00018591 |
Length: | 233 |
Species: | Caenorhabditis elegans |
Alignment Length: | 173 |
Identity: | 64/173 - (36%) |
Similarity: | 90/173 - (52%) |
Gaps: | 33/173 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 AFAAAMHRPFFNGYSTMQDMNS-------------------------GQGRVNQLGGVFINGRPL 44
||.|.|:.|:: |....|..| ..|| ||||..:..|.||
Worm 53 AFEAGMYNPYY--YPDTSDSGSPSSLSCSSLDYDVPPPPQYEKDVARSSGR-NQLGRTYSPGLPL 114
Fly 45 PNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEIENR 109
....|.:||::...|.:.|.||::|.|:|.|||||||||::|||::|. ...:.|..:| :...
Worm 115 SMCEREEIVKLFQGGWKICDISKRLCVTHSCVSKILNRYRQTGSVKPK--DAKEGRTESP-LVLA 176
Fly 110 IEEYKRSSPGMF-SWEIREKLIREGVCDRSTAPSVSAISRLVR 151
:.:| ||..||. ..||||:|||:|||.|..|||.|:|:.::|
Worm 177 VRDY-RSRLGMCRQSEIREQLIRDGVCTRDNAPSRSSINHILR 218
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
prd | NP_723721.1 |
PAX |
27..154 |
CDD:238076 |
56/126 (44%) |
Homeobox |
217..269 |
CDD:278475 |
|
npax-2 | NP_508396.3 |
PAX |
97..218 |
CDD:128645 |
55/125 (44%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0849 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.810 |
|
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