DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and Pax9

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_035171.1 Gene:Pax9 / 18511 MGIID:97493 Length:342 Species:Mus musculus


Alignment Length:360 Identity:124/360 - (34%)
Similarity:168/360 - (46%) Gaps:81/360 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 MNSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGS 88
            |....|.||||||||:|||||||.|||:|||:|..|||||.||||||||||||||||.||.||||
Mouse     1 MEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGS 65

  Fly    89 IRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGR 153
            |.||.|||||||:.||.:...|..||:..||:|:||||::|:.:||||:...||||:|||::|.:
Mouse    66 ILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 130

  Fly   154 DAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGK--------------------PSDEDI 198
                                     .|:....||:::.|                    |.....
Mouse   131 -------------------------IGNLAQQGHYDSYKQHQPAPQPALPYNHIYSYPSPITAAA 170

  Fly   199 SDCESEPG-------IALKRKQRRCRTTFSASQLDELERAFERTQYPDI-----YTREELAQRTN 251
            :...:.||       :||.|       |:.:|.           ...||     .|.:.::..:.
Mouse   171 AKVPTPPGVPAIPGSVALPR-------TWPSSH-----------SVTDILGIRSITDQGVSDSSP 217

  Fly   252 LTEARIQVWFSNRRARL--RKQHTSVSGGAPGGAAASVSHVAASSSLPSVVS--SVPSMAPLAMM 312
            ....:::.|.|..|...  ...| :|:|...|.......:..|.:.||:|.|  |..||||.. .
Mouse   218 YHSPKVEEWSSLGRNNFPAAAPH-AVNGLEKGALEQEAKYGQAPNGLPAVSSFVSASSMAPYP-T 280

  Fly   313 PGSLDPATVYQQQYDFYGSHANISVSAAAPMASSN 347
            |..:.|...|......|.:......:.:.|::..|
Mouse   281 PAQVSPYMTYSAAPSGYVAGHGWQHAGSTPLSPHN 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 85/126 (67%)
Homeodomain 214..270 CDD:459649 8/62 (13%)
Pax9NP_035171.1 PAX 6..131 CDD:238076 85/149 (57%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 7..63 45/55 (82%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 82..130 23/47 (49%)
Interaction with KDM5B. /evidence=ECO:0000250 168..189 3/20 (15%)

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