Protein Alignment prd and pax-3

DIOPT Version :9

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_496189.2
• Gene: pax-3 / 185022
• WormBaseID: WBGene00003939
• Length: 308
• Species: Caenorhabditis elegans
• Alignment Length: 340
• Identity: 133/340 - (39%)
• Similarity: 174/340 - (51%)
• Gaps: 63/340 - (18%)

  Fly    27 GQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRP 91
            |||||||||||||||||||.::|..|:.||..||:||.|||||:||||.||||||||.|||||.|
 Worm    13 GQGRVNQLGGVFINGRPLPIHVRHAIISMAKKGIKPCHISRQLKVSHGAVSKILNRYAETGSISP 77

  Fly    92 GVIGGS-KPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLV--RGR 153
            |.|||| :.|:....:|..|......:|.|.:.|:|:.||.:.:|.:..||:|.||.||:  :|.
 Worm    78 GQIGGSPRARLTVQAVEKEILIACDENPQMSAAELRDWLIHKDICTKGNAPTVPAIKRLIGNKGV 142

  Fly   154 DAP-------LDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKR 211
            ..|       |...:.|..|....:.:|:||   .|..|...:|...|
 Worm   143 GVPKKMERKRLSYSIDSILGISIDECSKSSS---DDEEGSSPSNDASS----------------- 187

  Fly   212 KQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRK-----Q 271
              ||.||:|:|.|||.||.||....||....||.:::.|.|:|.:|..||||||||.||     |
 Worm   188 --RRNRTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKIMTWFSNRRARCRKNMPMYQ 250

  Fly   272 HTSVSGGAPGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPG-SLDPATVYQQQYDFYGSHANI 335
            ..:|.|              ..||.||..:.:||  |:..:|. |..|     |....:..|
 Worm   251 QYNVQG--------------FGSSPPSYPTLLPS--PMMFLPSYSTSP-----QLNPLFFQH--- 291

  Fly   336 SVSAAAPMASSNLSP 350
             :..::|.:|.:..|
 Worm   292 -ILQSSPPSSQSSPP 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076	73/129 (57%)
		Homeobox	217..269	CDD:278475	27/51 (53%)
pax-3	NP_496189.2	PAX	13..141	CDD:238076	72/127 (57%)
		HOX	187..243	CDD:197696	30/74 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0849
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45636
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	5	4.870