DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and ARX

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_620689.1 Gene:ARX / 170302 HGNCID:18060 Length:562 Species:Homo sapiens


Alignment Length:439 Identity:123/439 - (28%)
Similarity:180/439 - (41%) Gaps:133/439 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 RPGVIG--GSKPR----IATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISR 148
            |.||.|  ||.|.    ..|.:.|..:.|.:...      :..|:|:.:   |........|.:.
Human   204 RLGVAGGPGSAPAAGGGTGTEDDEEELLEDEEDE------DEEEELLED---DEEELLEDDARAL 259

  Fly   149 LVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGG-----HHNNGKPSDEDISDC-----ES 203
            |...|..|:     :|:|:.|.....|.::.|.::|..     |..:.:..|.:.|.|     :|
Human   260 LKEPRRCPV-----AATGAVAAAAAAAVATEGGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDS 319

  Fly   204 EPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARL 268
            |.|: |||||||.||||::.||:||||||::|.|||::||||||.|.:|||||:||||.||||:.
Human   320 EEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKW 383

  Fly   269 RKQHTSVSGGAPGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHA 333
            ||:..:.:...|.|                    :|...||:    :..|.:.|.....|...|.
Human   384 RKREKAGAQTHPPG--------------------LPFPGPLS----ATHPLSPYLDASPFPPHHP 424

  Fly   334 NI-------SVSAAAPMASSNLSPGITTTPP----------------HHHQFYNPSANTASYIMP 375
            .:       :.:|||...|....||..:.||                .|..|.:|:         
Human   425 ALDSAWTAAAAAAAAAFPSLPPPPGSASLPPSGAPLGLSTFLGAAVFRHPAFISPA--------- 480

  Fly   376 GENGNTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQL-PPTPNSLSAVVS 439
                                .|.::.|           .:|..|.|:|...| .|||....||.|
Human   481 --------------------FGRLFST-----------MAPLTSASTAAALLRQPTPAVEGAVAS 514

  Fly   440 GAGVTSSSGANSGADPSQSLANASAGSEELSAALKVESVDLIAASQSQL 488
            ||          .|||:.:.|:..|.|   .|||::::.: .||..:||
Human   515 GA----------LADPATAAADRRASS---IAALRLKAKE-HAAQLTQL 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 15/69 (22%)
Homeodomain 214..270 CDD:459649 38/55 (69%)
ARXNP_620689.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..81
GCG-encoded polyalanine repeat 102..111
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..255 13/59 (22%)
Homeodomain 329..385 CDD:459649 38/55 (69%)
OAR 526..544 CDD:461067 5/21 (24%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 530..543 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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