DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and Poxn

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_314947.5 Gene:Poxn / 1275678 VectorBaseID:AGAMI1_009473 Length:636 Species:Anopheles gambiae


Alignment Length:609 Identity:161/609 - (26%)
Similarity:256/609 - (42%) Gaps:158/609 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VTAFAAAMHRPFFNGYSTMQDM-NSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVIS 66
            ::.|..|:::|     .|:.:| ::||..||||||||:||||||:.:|.:|||:|..|:|||.||
Mosquito    60 ISDFKTAINKP-----PTIVEMPHTGQAGVNQLGGVFVNGRPLPDIVRRRIVELALMGVRPCDIS 119

  Fly    67 RQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPR-IATPEIENRIEEYKRSSPGMFSWEIREKLI 130
            |||.||||||||||.|:.||||||||.|||||.: :|||.:..:|..:|:.:||||:||||::|:
Mosquito   120 RQLLVSHGCVSKILTRFYETGSIRPGSIGGSKTKQVATPTVVKKILRFKQENPGMFAWEIRDQLL 184

  Fly   131 REGVCDRSTAPSVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSD 195
            .:.:||.:|.||||:::|::|                                :||...:...|:
Mosquito   185 SQRICDPNTIPSVSSVNRILR--------------------------------NGGMWTDDMTSN 217

  Fly   196 EDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQY------PDIYTREELAQRTNLTE 254
            |.:....|....|..:.:........:..|::.:....:.:|      ||     ..::..||  
Mosquito   218 EQMLRESSHSSSAYMQSKAMSSHPLYSQTLEQHQALLNQYRYSMAAVSPD-----HASKHPNL-- 275

  Fly   255 ARIQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDPA 319
                           ..|.|..|..||.....|...||.:               .:...||.|.
Mosquito   276 ---------------PHHHSPYGSPPGAPGPMVQRTAAVN---------------IIQHESLPPT 310

  Fly   320 TVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHH-----QFYNPSANTA--------- 370
            ...:|..:.:..|      ..:|:.:..|:.|......|||     |...||.:.:         
Mosquito   311 GTTKQPPEMHHQH------TVSPLQTQPLTAGHNPHQHHHHHHQQQQHGKPSPSVSMPDLSSPKG 369

  Fly   371 --SYIMPGENGNTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAF--GQLPP-- 429
              |...|..:..:||||:..|||.......:        ..:|::...|.|:..|.  ||..|  
Mosquito   370 GDSKSEPSSSTRSTPTGSTPVSSAPPNPAQM--------PYLPKHWIWNTSLFYAANRGQHAPGA 426

  Fly   430 TPNSLSAVVSGAGVTSSSGANSGADP--------------------SQSLANASAGSEELSAALK 474
            .|:::|:..:.|...:::.|.:.|.|                    ..||.:.:..|...|:.::
Mosquito   427 DPSTVSSAAAAAAAAAAAAAAAAAFPHGYFTYGNPFGGGAPFPGQIESSLRSDTTASNASSSPVQ 491

  Fly   475 VESV---------DLIAASQSQLYGGWSSMQALRPNAPLSPEDSLN--------STSSTSQALDV 522
            :..|         |.:..|.|:....:|..:.|:  .|.|.:..::        |.||.....|.
Mosquito   492 ITDVNSDDSSDNHDELRTSISKKRNPYSIEELLK--KPESKKQKIDDRVTITCISDSSRKTPTDS 554

  Fly   523 TAHQMFHPYQHTPQYA---SYPAP 543
            .....:|.||.:|..:   |.|:|
Mosquito   555 PLDDKYHHYQCSPSVSPSKSCPSP 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076 77/127 (61%)
Homeodomain 214..270 CDD:459649 6/61 (10%)
PoxnXP_314947.5 None

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