DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and Alx4

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_031468.1 Gene:Alx4 / 11695 MGIID:108359 Length:399 Species:Mus musculus


Alignment Length:246 Identity:81/246 - (32%)
Similarity:111/246 - (45%) Gaps:64/246 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 LDNDMSSASGSPA-GDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTF 220
            :||...|...:.| |...:||:..             ||..:.:|.||..|     |:||.||||
Mouse   163 MDNSYLSVKETGAKGPQDRASAEI-------------PSPLEKTDSESNKG-----KKRRNRTTF 209

  Fly   221 SASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQ-----------HTS 274
            ::.||:|||:.|::|.|||:|.||:||.||:|||||:||||.||||:.||:           |.|
Mouse   210 TSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFS 274

  Fly   275 VSGGAPGGAAAS----------VSHVAASSSLPSVVSSVP-SMAPLAMMPGSLDPATVYQQQYDF 328
            .:...|....|.          :.:..|:|.:|:.|  || ...|..|.|.:..|.:......||
Mouse   275 TAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACV--VPCDPVPACMSPHAHPPGSGASSVSDF 337

  Fly   329 YGSHANISVSAAAPMASSNLSPGITTTPPHHHQFYNPSANTASYIMPGENG 379
                  :|||.|.               .|..|.:..|...|:.|.||.||
Mouse   338 ------LSVSGAG---------------SHVGQTHMGSLFGAAGISPGLNG 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076
Homeodomain 214..270 CDD:459649 36/55 (65%)
Alx4NP_031468.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..133
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..206 13/52 (25%)
Homeodomain 203..259 CDD:459649 36/55 (65%)
OAR 375..393 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 379..392
Blue background indicates that the domain is not in the aligned region.

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