Protein Alignment prd and Pax3

DIOPT Version :9

• Sequence 1: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Sequence 2: NP_446162.1
• Gene: Pax3 / 114502
• RGDID: 620431
• Length: 484
• Species: Rattus norvegicus
• Alignment Length: 547
• Identity: 226/547 - (41%)
• Similarity: 292/547 - (53%)
• Gaps: 119/547 - (21%)

  Fly    27 GQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRP 91
            ||||||||||||||||||||:||.||||||..||||||||||||||||||||||.||||||||||
  Rat    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98

  Fly    92 GVIGGSKPR-IATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVR---- 151
            |.||||||: :.||::|.:||||||.:|||||||||:||:::.||||:|.||||:|||::|
  Rat    99 GAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFG 163

  Fly   152 -GRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRR 215
             |.:...|.:...|..|.    .||..|....:|   .....|..::.||.:|||.:.|||||||
  Rat   164 KGEEEEADLERKEAEESE----KKAKHSIDGILS---ERASAPQSDEGSDIDSEPDLPLKRKQRR 221

  Fly   216 CRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGA- 279
            .||||:|.||:|||||||||.|||||||||||||..|||||:||||||||||.|||     .||
  Rat   222 SRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ-----AGAN 281

  Fly   280 ---------PGGAAASVSHVAASSSLPSVVSSVPSMAPLAMMPGSLDP-ATVYQQQYDFYGSHAN 334
                     |||...:     |..:||:...|..|..|.::.....|| :||::.|
  Rat   282 QLMAFNHLIPGGFPPT-----AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQ--------- 332

  Fly   335 ISVSAAAPMASSNLSPGITTTPPHHHQFYNPS--ANTASYIMPGENGNTTPTGNIIVSSYETQLG 397
                   |:..|.:           ||...||  .::::|.:|...
  Rat   333 -------PLPPSTV-----------HQSTIPSNADSSSAYCLPSTR------------------- 360

  Fly   398 SVYGTETETHQTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGANSGADPSQSLANA 462
              :|..:.|...:|.: .|:..::.|.|      |.||..|.|. :|:..|.........:|:..
  Rat   361 --HGFSSYTDSFVPPS-GPSNPMNPAIG------NGLSPQVMGL-LTNHGGVPHQPQTDYALSPL 415

  Fly   463 SAGSEELSAALKVESVDLIAASQSQLYGGWSSMQALRPNAPLSPEDSLNSTSSTSQALD-VTAHQ 526
            :.|         :|....::||.||......::.:|..:.|..|.    :.|:|..::| ||.:
  Rat   416 TGG---------LEPTTTVSASCSQRLEHMKNVDSLPTSQPYCPP----TYSTTGYSMDPVTGY- 466

  Fly   527 MFHPYQHTPQYASYPAPGHAHSHHGHP 553
                     ||..|   |.:..|:..|
  Rat   467 ---------QYGQY---GQSAFHYLKP 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
prd	NP_723721.1	PAX	27..154	CDD:238076	101/132 (77%)
		Homeobox	217..269	CDD:278475	44/51 (86%)
Pax3	NP_446162.1	PAX	34..159	CDD:128645	99/124 (80%)
		MFAP1	164..>286	CDD:336570	70/133 (53%)
		Homeobox	222..276	CDD:333795	44/53 (83%)
		Pax7	347..391	CDD:289156	11/71 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	211	1.000	Domainoid score	I2702
eggNOG	1	0.900	-	-		E1_KOG0849
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	332	1.000	Inparanoid score	I2342
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1126858at2759
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	1	1.000	-	-		mtm9073
orthoMCL	1	0.900	-	-		OOG6_105365
Panther	1	1.100	-	-	O	PTHR45636
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1205
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.830