DRSC/TRiP Functional Genomics Resources

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Protein Alignment prd and CPHXL

DIOPT Version :10

Sequence 1:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001342542.1 Gene:CPHXL / 105371346 HGNCID:51815 Length:405 Species:Homo sapiens


Alignment Length:430 Identity:85/430 - (19%)
Similarity:115/430 - (26%) Gaps:189/430 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 DGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERT 235
            |||    |.|......|||..:.:..             |||.:. |..||...|.||:..|...
Human     4 DGT----SGGFPAEEDHHNEERQTKN-------------KRKTKH-RHKFSEELLQELKEIFGEN 50

  Fly   236 QYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSGGAPGGAAASVSHVAASSSLPSVV 300
            .|||..||:.||.:.:.....|..||.|:||||                                
Human    51 CYPDYTTRKTLAIKFDCPVNVIDNWFQNKRARL-------------------------------- 83

  Fly   301 SSVPSMAPLAMMPGSLDPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQFYNP 365
                       .|.......|.|:::||                           |...|.|   
Human    84 -----------PPAERRRIFVLQKKHDF---------------------------PVQAHSF--- 107

  Fly   366 SANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQLPPT 430
                                   :|..|||..:             .|.:..:|:|.|       
Human   108 -----------------------LSCQETQAAA-------------HNYATKQSLSGA------- 129

  Fly   431 PNSLSAVVSGAGVTSSSGANSGADPSQ-------SLANASAGSEELSAALKVESVDLIAASQSQL 488
               ..|::..||   .|.......|||       ||.|....|:::..                 
Human   130 ---QRALMRRAG---CSHLEKQWIPSQEMGYNCFSLENQETPSQQVGP----------------- 171

  Fly   489 YGGWSSMQALRPNAPLSPEDSLNSTSSTSQALDVTAHQMFHPYQHTPQYASY------PAPGHAH 547
                   |......|..|...:.|..|..:.|.:       |.|.....:||      ..||.|.
Human   172 -------QCSYLEKPGIPSQQVGSQCSYLEKLGI-------PSQQVASQSSYLVTGTEKHPGCAM 222

  Fly   548 SH-----HGHPHAPHPHAHPHPQYAGAHPHYPPPSSSAHF 582
            .:     .||..:.|..|:....|..|...:|||||..:|
Human   223 GYGGDTGSGHSGSGHSTAYHFLSYNSAECLHPPPSSVPYF 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prdNP_723721.1 PAX 27..154 CDD:238076
Homeodomain 214..270 CDD:459649 22/55 (40%)
CPHXLNP_001342542.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 11/46 (24%)
HOX 28..82 CDD:197696 20/54 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..363
Blue background indicates that the domain is not in the aligned region.

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