DRSC/TRiP Functional Genomics Resources

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Protein Alignment firl and rdh10

DIOPT Version :10

Sequence 1:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_001011091.1 Gene:rdh10 / 496504 XenbaseID:XB-GENE-944961 Length:341 Species:Xenopus tropicalis


Alignment Length:302 Identity:96/302 - (31%)
Similarity:160/302 - (52%) Gaps:27/302 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLQFFELYVRILLELFVSLVQIVLPKKQKDVSGEIVLITGTGHGIGRELALHYASLGSTVVCVDI 87
            ||:||.:..::|....::..:.::..|.|.|:|::.||||.|.|:||..||.:|...:.:|..||
 Frog     4 VLEFFLVTFKVLWAFVLAAAKWLVRPKDKSVAGQVCLITGAGSGLGRLFALEFARRRAQLVLWDI 68

  Fly    88 DGKNNLQTVEKAKRL--------------NLGE----------VYSYSCDVSKRDEVTALADRIK 128
            :.::|.:|.|..:.:              |..|          ||:|:|||.||:.|.:.|:|::
 Frog    69 NSQSNEETAEMVRSIYRELEAEDSARRAGNATEEEVQPCCNFQVYTYTCDVGKRESVYSTAERVR 133

  Fly   129 SDVGCISVLVNNVGIMPTHPILQQSAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSI 193
            .:||.:.:|:||.|::..|.:|:...|.|:|...||..:.|||.:||||.|.|...|||:.::|.
 Frog   134 REVGDVYLLLNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPKMMEMNHGHIVSVASS 198

  Fly   194 AGLVGISNLVPYCATKFAVRGLMEALHAELRQGPFRDLIRTTTIFPYMTNTGLCKHPKVK--FPS 256
            .||...:.:..|||:||.|.|..|:|..||:... :|.|:||.:.||:.:||:.:..:::  ...
 Frog   199 LGLFSTAGVEDYCASKFGVVGFHESLSHELKAAD-KDGIKTTLVCPYLVDTGMFRGCRIRKEIEP 262

  Fly   257 ILGLLDPKQVAKRIVEAHRTDLMEVTIPSCLLYINNWTRLLP 298
            .|..|.|....|:.:.|..||...:..|..:..:.....:||
 Frog   263 FLPPLKPDYCVKQAMRAILTDQPMICTPRLMYIVTCMKSILP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
firlNP_001033900.2 17beta-HSDXI-like_SDR_c 57..299 CDD:187598 87/268 (32%)
rdh10NP_001011091.1 17beta-HSDXI-like_SDR_c 38..307 CDD:187598 87/268 (32%)

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