DRSC/TRiP Functional Genomics Resources

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Protein Alignment firl and sdr16c5

DIOPT Version :10

Sequence 1:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_001004963.1 Gene:sdr16c5 / 448386 XenbaseID:XB-GENE-942748 Length:305 Species:Xenopus tropicalis


Alignment Length:290 Identity:104/290 - (35%)
Similarity:170/290 - (58%) Gaps:12/290 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FFELYVRILLELFVSLVQIVL---PKKQKDVSGEIVLITGTGHGIGRELALHYASLGSTVVCVDI 87
            |.|....:.|.::::|...||   |.::|:|:||||||||.|.||||.:||.:|.||:|:|..||
 Frog     4 FLETLKVLFLTIYLNLESFVLWFIPSRKKNVAGEIVLITGAGSGIGRLMALEFAHLGATLVLWDI 68

  Fly    88 DGKNNLQTVEKAKRLNLGEVYSYSCDVSKRDEVTALADRIKSDVGCISVLVNNVGIMPTHPILQQ 152
            :.:.|.:|...||:.....|::|.||.|||.||..:||::|.:||.:|:|:||.||:.....:..
 Frog    69 NEEGNKETCRLAKKNGAVRVHAYLCDCSKRQEVYKVADQVKKEVGDVSILINNAGIVTGKKFIDS 133

  Fly   153 SAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGISNLVPYCATKFAVRGLME 217
            ....:::...||..:.|||.:||||.|.....||::.::|.|||:|::.|..|||:|||..|..|
 Frog   134 PDALVEKTMQVNCMAHFWTYKAFLPAMMASNHGHLVSIASSAGLIGVNGLADYCASKFAAVGFAE 198

  Fly   218 ALHAEL----RQGPFRDLIRTTTIFPYMTNTGLCKHPKVKFPSILGLLDPKQVAKRIVEAHRTDL 278
            ::..|:    :.|     |:||.:.||..|||:......|:|.:|.:|:.:..:|:||:|...|.
 Frog   199 SVGLEMLALGKTG-----IKTTIVCPYFINTGMFDGCSTKWPRLLPILEAEYASKKIVDAILKDQ 258

  Fly   279 MEVTIPSCLLYINNWTRLLPDHCGLMLKDF 308
            :.:.:|..|..:.....::....|::|.::
 Frog   259 VYLVMPRSLYIMFALKNIMSTKLGVVLGNY 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
firlNP_001033900.2 17beta-HSDXI-like_SDR_c 57..299 CDD:187598 91/245 (37%)
sdr16c5NP_001004963.1 17beta-HSDXI-like_SDR_c 38..281 CDD:187598 91/247 (37%)

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