DRSC/TRiP Functional Genomics Resources

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Protein Alignment firl and sdr16c5a

DIOPT Version :10

Sequence 1:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_998043.2 Gene:sdr16c5a / 405814 ZFINID:ZDB-GENE-040426-2049 Length:306 Species:Danio rerio


Alignment Length:281 Identity:110/281 - (39%)
Similarity:170/281 - (60%) Gaps:4/281 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DVLKDVLQFFELYVRILLELFVSLVQIVLPKKQKDVSGEIVLITGTGHGIGRELALHYASLGSTV 82
            ::|.:.|:...|.|...||.|   ::..:|.::||||||||||||:|.||||.:||.:|||..::
Zfish     2 NILLETLRLIFLTVYYNLEAF---LKFFIPLRKKDVSGEIVLITGSGSGIGRLMALEFASLDVSL 63

  Fly    83 VCVDIDGKNNLQTVEKAKRLNLGEVYSYSCDVSKRDEVTALADRIKSDVGCISVLVNNVGIMPTH 147
            |..||:.....:|.|:.|......|:.|.||.|.|:.|..:||::||::|.:::|:||.||:...
Zfish    64 VLWDINVDGLKETAEQVKEKGASRVHYYQCDCSDREAVYRVADQVKSEIGDVTILINNAGIVSGK 128

  Fly   148 PILQQSAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGISNLVPYCATKFAV 212
            ..:......|::...||..|.|||.:||||.|.:|..||::.::|.|||:|::.|..|||:|||.
Zfish   129 KFMDTPDALIEKTLRVNAMSHFWTYKAFLPAMMDKNHGHLVSVASSAGLIGVNGLADYCASKFAA 193

  Fly   213 RGLMEALHAELRQGPFRDLIRTTTIFPYMTNTGLCKHPKVKFPSILGLLDPKQVAKRIVEAHRTD 277
            .|..|::..||.... :|.|:||.:.|::.||||......|:|.::.:|:|..||||||.|..||
Zfish   194 VGFAESVALELLSAG-KDGIKTTIVCPFLINTGLFDGCGTKWPLLMPMLEPDYVAKRIVSAILTD 257

  Fly   278 LMEVTIPSCLLYINNWTRLLP 298
            .:.|.:|..|.::.....::|
Zfish   258 QVFVLLPRSLYFLMALKGVIP 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
firlNP_001033900.2 17beta-HSDXI-like_SDR_c 57..299 CDD:187598 96/242 (40%)
sdr16c5aNP_998043.2 17beta-HSDXI-like_SDR_c 38..280 CDD:187598 96/242 (40%)

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