DRSC/TRiP Functional Genomics Resources

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Protein Alignment firl and hsd20b2

DIOPT Version :10

Sequence 1:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_001373557.1 Gene:hsd20b2 / 368367 ZFINID:ZDB-GENE-030804-21 Length:329 Species:Danio rerio


Alignment Length:222 Identity:59/222 - (26%)
Similarity:92/222 - (41%) Gaps:42/222 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GEIVLITGTGHGIGRELALHYASLGSTVVCV------------DIDGKNNLQT-VEKAKRLNLGE 106
            |...::||...||||..|...|..|..:|.:            :|:.|.|.:| |.:|.......
Zfish    54 GRWAVVTGATSGIGRAYAEELAKRGLNIVLISRSEEKLHRVAKEIEDKYNQKTHVIQADFTEGHS 118

  Fly   107 VYSYSCDVSKRDEVTALADRIKSDVGCISVLVNNV-----GIMPTHPILQQSAEEIQRVFDVNVF 166
            :||         .:|...:.::     |.:|||||     |::.....:....:.|.:|.:.|..
Zfish   119 IYS---------TITKQLEGLE-----IGILVNNVGMNYIGVLANFLDVPDPDQRITQVLNCNTL 169

  Fly   167 SQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGISNLVPYCATKFAVRGLMEALHAELR-QGPFRD 230
            |.....:..||.|.|:.:|.||.:||.||...:..:..|.|||..|......|:||.| :|    
Zfish   170 SVTQMCRVILPGMVERGKGLIINISSEAGYQPVPMVSLYSATKAFVTYFSLGLNAEYRSKG---- 230

  Fly   231 LIRTTTIFPYMTNTGLCK----HPKVK 253
             |....:.|:|.:|.:..    :|.||
Zfish   231 -ITVQCVAPFMVSTNMTHNVPVNPLVK 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
firlNP_001033900.2 17beta-HSDXI-like_SDR_c 57..299 CDD:187598 58/220 (26%)
hsd20b2NP_001373557.1 17beta-HSD1_like_SDR_c 54..296 CDD:187614 59/222 (27%)

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