DRSC/TRiP Functional Genomics Resources

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Protein Alignment firl and Sdr16c5

DIOPT Version :10

Sequence 1:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_001100104.1 Gene:Sdr16c5 / 297805 RGDID:1565999 Length:309 Species:Rattus norvegicus


Alignment Length:289 Identity:105/289 - (36%)
Similarity:174/289 - (60%) Gaps:4/289 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KDVLQFFELYVRILLELFVSLVQIVLPKKQKDVSGEIVLITGTGHGIGRELALHYASLGSTVVCV 85
            ||:|.|..   :.||.:..:|:..|:.|.:|:|:||:|||||.|.|:||.|||.:|.|||.:|..
  Rat     9 KDLLVFLG---KSLLSILEALLSHVISKPRKNVAGEVVLITGAGSGLGRLLALQFARLGSVLVLW 70

  Fly    86 DIDGKNNLQTVEKAKRLNLGEVYSYSCDVSKRDEVTALADRIKSDVGCISVLVNNVGIMPTHPIL 150
            |::.:.|.:|.:.|:......|::|:||.|:|:||..:||::|.:||.:|:|:||.||:.....|
  Rat    71 DVNKETNEETRQIAQEAGAIRVHAYTCDCSQREEVYRVADQVKKEVGDVSILINNAGIVTGRKFL 135

  Fly   151 QQSAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGISNLVPYCATKFAVRGL 215
            ....:.:::..|||..:..|..:||||.|.....||::|:||.|||:|::.|..|||:|||..|.
  Rat   136 DCPDDLMEKSLDVNFKAHLWMYKAFLPAMIANNHGHLVCISSSAGLIGVNGLSDYCASKFAALGF 200

  Fly   216 MEALHAELRQGPFRDLIRTTTIFPYMTNTGLCKHPKVKFPSILGLLDPKQVAKRIVEAHRTDLME 280
            .|::..|......|. |:||.:.|:...||:.:....|.|::|.:|||:...::||:|...:.:.
  Rat   201 AESMFVETLAQKQRG-IKTTIVCPFFIKTGMFEGCTTKCPNLLPILDPEYAVRKIVDAILQEQLY 264

  Fly   281 VTIPSCLLYINNWTRLLPDHCGLMLKDFI 309
            :.:|..|.:|......||...|:::.|::
  Rat   265 LYMPKFLYFIMFLKSFLPIKTGILIADYL 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
firlNP_001033900.2 17beta-HSDXI-like_SDR_c 57..299 CDD:187598 89/241 (37%)
Sdr16c5NP_001100104.1 17beta-HSDXI-like_SDR_c 42..284 CDD:187598 90/242 (37%)

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